| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1175 |
|---|
| Symbol | |
|---|
| ID | 4251459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 1379827 |
|---|
| End bp | 1380171 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638117756 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733312 |
|---|
| Protein GI | 113969519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000166401 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA CTATTTTAAA GCTCGTTTTT ATCGCGATTG GTTTGTTTCT GGTTTATAAA
CTGATCTTTG CAGGTAAGAA GGGACTGACT ATTTTTGAAA TGCATTTTAA AGATGGTCGC
ATGACTCAAC ATAAAGGCAA AATCCCCGAG CGTTTCGAAC GCGAATGTCG CCAGCTGGCC
AAAGCGGAAA AGCTGACTTG CACTATTAGA GCAGAAAAAA ACTCCGGCGT GCGTCTGCAT
ATTTCTGCCA ATGTGAATGA CAACCTGCAG CAGCGGATCC GTAACCAATT TCCCTTCGAG
TATTACGATA AAAAGGCGGT CGACAATAGC CGCCAAGCGG GTTAA
|
|---|
| Protein sequence | MTATILKLVF IAIGLFLVYK LIFAGKKGLT IFEMHFKDGR MTQHKGKIPE RFERECRQLA
KAEKLTCTIR AEKNSGVRLH ISANVNDNLQ QRIRNQFPFE YYDKKAVDNS RQAG
|
|---|
| |