Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1173 |
Symbol | |
ID | 4251457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1378886 |
End bp | 1379434 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117754 |
Product | hypothetical protein |
Protein accession | YP_733310 |
Protein GI | 113969517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000305778 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGC TAAAGCTTAA CTGGGGAAAG CCTGTTGTCT TAGGGTTGTT GATGGCCAGT CTTTTGACGA GCTGCTCCAG CGTCGATGTG AGTGACTATC GAGATACTAA TCCCCCCTTA GTGTTAGAAA GCTTCTTTAA TGGCCCGCTT AAGGCATCGG GCATTGTTGA GAACTTCAGT GGCAAAGTGA TACGTCGGTT TAATGTCACT ATGGAGGCGA GTTGGCAGGG GGCGGAAGGC ACCATCAAAG AGTGGTTTAT CTATGATGAT GGTGAAACCC AAACTCGCAT TTGGCGCATT CAATCCCAAG GAGAAGGGAA ATACACTGGC ATGGCTGACG ATATTATCGG TACCGCGGAA GGGAAGGCGA GCGGGAGTGC GCTGCGTTGG CGCTACGATA TGCTACTGCC CGTCGAGGGT GATGAATACC AAGTGCACTT TGATGATTGG ATGTACTTAG TGAACGACAA TACCATTATT AATCAAAGCG ATATTATTAA ATGGGGCGTC ACTGTCGCCA AAGTGACCTT AGTGATCCAA AAGCATTAA
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Protein sequence | MRLLKLNWGK PVVLGLLMAS LLTSCSSVDV SDYRDTNPPL VLESFFNGPL KASGIVENFS GKVIRRFNVT MEASWQGAEG TIKEWFIYDD GETQTRIWRI QSQGEGKYTG MADDIIGTAE GKASGSALRW RYDMLLPVEG DEYQVHFDDW MYLVNDNTII NQSDIIKWGV TVAKVTLVIQ KH
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