Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1168 |
Symbol | |
ID | 4251452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1374417 |
End bp | 1375667 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117749 |
Product | amine oxidase |
Protein accession | YP_733305 |
Protein GI | 113969512 |
COG category | [R] General function prediction only |
COG ID | [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TTGCCATTGT AGGGACGGGA ATTTCAGGGC TGACCTGTGG CTATCTACTC AGCCAATCCC ACAAGGTTAC TGTGTTTGAG GCCAATGACT ATATAGGCGG CCATACCGCG ACCGTGGATG TGGAGCATCT TGGTAAACAC TATGCGATAG ACACTGGTTT TATCGTGTTT AACGACCGAA CTTATCCCCG TTTTGAACGG CTGTTAGCCC GTTTAAATGT CAGTATTTTG CCGACCGAAA TGAGTTTTAG TGTGCACAAC GCCCTAACGG GGCTTGAGTA CAATGGCCAT AACGTTGCCA GTTTGTTTGC CCAAAAGCGT AACCTCCTGA ATCCGCGCTT TTGGGCCTTT TTAAATGAAA TTGTGCGCTT TAATAAAAGC TGCAAGGCGA TTTATCAGCA GGATAATTAC CCCGCTGGCA ACTTGGGTGA GTTTCTCGAC CGCGAGCAGT TTTCTCACTT TTTTGCCGAA CATTATATTT TGCCCATGGG CGCGGCAATT TGGTCATCGA GCATCGAGGA TATGCGCGCC TTTTCGCTGC GTTTCTTTAT CCGTTTCTTT GAGCACCATG GCTTATTAAA TGTCAGTAAC AGACCGCAAT GGTATGTGCT TAAGGGTGGC TCACGCAGTT ATATACCTGA TTTAATTGCC CCTTTTAAAG ACAGTCTGCA TTTAAACAGC CCAGTGAGTG CCATCGAACG CCATGCTGAC GGCGTAAAAC TCTATGTGAA TGGTGAGTGG AAGGAATTCG ATGAGGTGAT CCTCGCTTGT CATAGCGACC AAGCGCTTAA GATGTTAACT GATGCCAGCT CGGCCGAAAA AACGATTCTG GGTGACTTGC AGTATCAAAA TAATGAGGTG GTTTTACATA CAGATACCAA CCTTTTACCT AAGCGCAAGG CGGCGTGGGC CAGCTGGAAT TATCGTTTGG ATGGCAATCA AAAACGCCCC GCCTCTGTGA CTTACAATAT GAATATTCTG CAGCGCCTAC CTAGCGACGC GCCAACCTTC TGCGTAACGC TTAACCAGAC TGAGCTGATT GACGAAGCCA AAATTCTGCG CCGTTTTAAT TATGCGCACC CAGTGTTTAA TGAGCAGAGT TTACATGCGC AGGCGCGCCG GGAAGAAATC TCGGGCCAAA ACCATACCCA TTTTGCGGGC GCCTATTGGC ACAACGGTTT CCATGAAGAC GGTGTCCGCA GCGCCTTAGA TGTGTGCGCT CACTTTGGGG TTACGCTATG A
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Protein sequence | MKNIAIVGTG ISGLTCGYLL SQSHKVTVFE ANDYIGGHTA TVDVEHLGKH YAIDTGFIVF NDRTYPRFER LLARLNVSIL PTEMSFSVHN ALTGLEYNGH NVASLFAQKR NLLNPRFWAF LNEIVRFNKS CKAIYQQDNY PAGNLGEFLD REQFSHFFAE HYILPMGAAI WSSSIEDMRA FSLRFFIRFF EHHGLLNVSN RPQWYVLKGG SRSYIPDLIA PFKDSLHLNS PVSAIERHAD GVKLYVNGEW KEFDEVILAC HSDQALKMLT DASSAEKTIL GDLQYQNNEV VLHTDTNLLP KRKAAWASWN YRLDGNQKRP ASVTYNMNIL QRLPSDAPTF CVTLNQTELI DEAKILRRFN YAHPVFNEQS LHAQARREEI SGQNHTHFAG AYWHNGFHED GVRSALDVCA HFGVTL
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