Gene Shewmr4_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1168 
Symbol 
ID4251452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1374417 
End bp1375667 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content48% 
IMG OID638117749 
Productamine oxidase 
Protein accessionYP_733305 
Protein GI113969512 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTGCCATTGT AGGGACGGGA ATTTCAGGGC TGACCTGTGG CTATCTACTC 
AGCCAATCCC ACAAGGTTAC TGTGTTTGAG GCCAATGACT ATATAGGCGG CCATACCGCG
ACCGTGGATG TGGAGCATCT TGGTAAACAC TATGCGATAG ACACTGGTTT TATCGTGTTT
AACGACCGAA CTTATCCCCG TTTTGAACGG CTGTTAGCCC GTTTAAATGT CAGTATTTTG
CCGACCGAAA TGAGTTTTAG TGTGCACAAC GCCCTAACGG GGCTTGAGTA CAATGGCCAT
AACGTTGCCA GTTTGTTTGC CCAAAAGCGT AACCTCCTGA ATCCGCGCTT TTGGGCCTTT
TTAAATGAAA TTGTGCGCTT TAATAAAAGC TGCAAGGCGA TTTATCAGCA GGATAATTAC
CCCGCTGGCA ACTTGGGTGA GTTTCTCGAC CGCGAGCAGT TTTCTCACTT TTTTGCCGAA
CATTATATTT TGCCCATGGG CGCGGCAATT TGGTCATCGA GCATCGAGGA TATGCGCGCC
TTTTCGCTGC GTTTCTTTAT CCGTTTCTTT GAGCACCATG GCTTATTAAA TGTCAGTAAC
AGACCGCAAT GGTATGTGCT TAAGGGTGGC TCACGCAGTT ATATACCTGA TTTAATTGCC
CCTTTTAAAG ACAGTCTGCA TTTAAACAGC CCAGTGAGTG CCATCGAACG CCATGCTGAC
GGCGTAAAAC TCTATGTGAA TGGTGAGTGG AAGGAATTCG ATGAGGTGAT CCTCGCTTGT
CATAGCGACC AAGCGCTTAA GATGTTAACT GATGCCAGCT CGGCCGAAAA AACGATTCTG
GGTGACTTGC AGTATCAAAA TAATGAGGTG GTTTTACATA CAGATACCAA CCTTTTACCT
AAGCGCAAGG CGGCGTGGGC CAGCTGGAAT TATCGTTTGG ATGGCAATCA AAAACGCCCC
GCCTCTGTGA CTTACAATAT GAATATTCTG CAGCGCCTAC CTAGCGACGC GCCAACCTTC
TGCGTAACGC TTAACCAGAC TGAGCTGATT GACGAAGCCA AAATTCTGCG CCGTTTTAAT
TATGCGCACC CAGTGTTTAA TGAGCAGAGT TTACATGCGC AGGCGCGCCG GGAAGAAATC
TCGGGCCAAA ACCATACCCA TTTTGCGGGC GCCTATTGGC ACAACGGTTT CCATGAAGAC
GGTGTCCGCA GCGCCTTAGA TGTGTGCGCT CACTTTGGGG TTACGCTATG A
 
Protein sequence
MKNIAIVGTG ISGLTCGYLL SQSHKVTVFE ANDYIGGHTA TVDVEHLGKH YAIDTGFIVF 
NDRTYPRFER LLARLNVSIL PTEMSFSVHN ALTGLEYNGH NVASLFAQKR NLLNPRFWAF
LNEIVRFNKS CKAIYQQDNY PAGNLGEFLD REQFSHFFAE HYILPMGAAI WSSSIEDMRA
FSLRFFIRFF EHHGLLNVSN RPQWYVLKGG SRSYIPDLIA PFKDSLHLNS PVSAIERHAD
GVKLYVNGEW KEFDEVILAC HSDQALKMLT DASSAEKTIL GDLQYQNNEV VLHTDTNLLP
KRKAAWASWN YRLDGNQKRP ASVTYNMNIL QRLPSDAPTF CVTLNQTELI DEAKILRRFN
YAHPVFNEQS LHAQARREEI SGQNHTHFAG AYWHNGFHED GVRSALDVCA HFGVTL