Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1163 |
Symbol | |
ID | 4251447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1369542 |
End bp | 1370495 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117744 |
Product | hypothetical protein |
Protein accession | YP_733300 |
Protein GI | 113969507 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGT TTAATCCGCA GCGAATTCAA ATTGGGATCA GTGCCTGCCT ACTAGGGGAG AAGGTGCGTT TTGACGGTGG GCATAAAAAT TCTTCCTATT GTAATCAAGA GATTGCCCCT TTTTTTGATT ATGTTCCCTT GTGTCCAGAA ATGGCGATTG GCCTAGGTGC ACCGCGAAAA AGCATTCGAT TAGTGCGCGA TGGTGAGCAG ATCCGAGTGC AGAGTGGTGA TGGCAGCTTA GATGTCACCG ACAAACTCAA TCGCTTTAGC GAGCAAAAGG TTGAGGAATT AGGCTTTTTA GGCGGTTACT TACTCTGCGC CAAATCGCCA ACCTGCGGTA TGAAACGGGT GACTGAGTAC AAAATCGGTA CCAATAATGG CACTAAATCA GGCATTGGAG TGTTTGCCCG TAAATTAATG GAACGCTACC CCTATCTCCC CGTCGAGGAA GAAGGTCGCC TGCACGATAT GGTGCTGCGG GAAAACTTTT TTACCCGAGT CTATGCCTAT CACGACTGGC ATAAGATGTG TCATGAGGGC CTAACCAAGC ACAAGTTAGT CAAGTTTCAC TCCCGCTATA AGTACCTATT GATGGCCCAT AGCCCTAAAT GGTACCGCGA GCTAGGGCCG ATTGTGGCCA ATATTGAAGA CTTAGATCAA ACCGCCGAGC GCTATTTTGC GGGCTTTATG ACCGCCTTAA AAATCAATGC GACCCGTCGA AACCATACCA GCACCTTACA ACATATTCAG GGCTATTTTA AAAAGCATTT GAATAAGGAA CAGAAGTTAG AACTGTCTGA AATGATTATG AAATATCGCC AAGGGCTTCT CCCTTTGCTG GTGCCTATCA CTTTGATTAA CCACTATTTG CGCCAATTTC CCACCCCCTA TATTGAGGAT CAAGTGTACT TAAATCCCCA TCCTGAGGAA TTAAAGCTGC GCTATGCCTA TTAA
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Protein sequence | MYKFNPQRIQ IGISACLLGE KVRFDGGHKN SSYCNQEIAP FFDYVPLCPE MAIGLGAPRK SIRLVRDGEQ IRVQSGDGSL DVTDKLNRFS EQKVEELGFL GGYLLCAKSP TCGMKRVTEY KIGTNNGTKS GIGVFARKLM ERYPYLPVEE EGRLHDMVLR ENFFTRVYAY HDWHKMCHEG LTKHKLVKFH SRYKYLLMAH SPKWYRELGP IVANIEDLDQ TAERYFAGFM TALKINATRR NHTSTLQHIQ GYFKKHLNKE QKLELSEMIM KYRQGLLPLL VPITLINHYL RQFPTPYIED QVYLNPHPEE LKLRYAY
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