Gene Shewmr4_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1163 
Symbol 
ID4251447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1369542 
End bp1370495 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content46% 
IMG OID638117744 
Producthypothetical protein 
Protein accessionYP_733300 
Protein GI113969507 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGT TTAATCCGCA GCGAATTCAA ATTGGGATCA GTGCCTGCCT ACTAGGGGAG 
AAGGTGCGTT TTGACGGTGG GCATAAAAAT TCTTCCTATT GTAATCAAGA GATTGCCCCT
TTTTTTGATT ATGTTCCCTT GTGTCCAGAA ATGGCGATTG GCCTAGGTGC ACCGCGAAAA
AGCATTCGAT TAGTGCGCGA TGGTGAGCAG ATCCGAGTGC AGAGTGGTGA TGGCAGCTTA
GATGTCACCG ACAAACTCAA TCGCTTTAGC GAGCAAAAGG TTGAGGAATT AGGCTTTTTA
GGCGGTTACT TACTCTGCGC CAAATCGCCA ACCTGCGGTA TGAAACGGGT GACTGAGTAC
AAAATCGGTA CCAATAATGG CACTAAATCA GGCATTGGAG TGTTTGCCCG TAAATTAATG
GAACGCTACC CCTATCTCCC CGTCGAGGAA GAAGGTCGCC TGCACGATAT GGTGCTGCGG
GAAAACTTTT TTACCCGAGT CTATGCCTAT CACGACTGGC ATAAGATGTG TCATGAGGGC
CTAACCAAGC ACAAGTTAGT CAAGTTTCAC TCCCGCTATA AGTACCTATT GATGGCCCAT
AGCCCTAAAT GGTACCGCGA GCTAGGGCCG ATTGTGGCCA ATATTGAAGA CTTAGATCAA
ACCGCCGAGC GCTATTTTGC GGGCTTTATG ACCGCCTTAA AAATCAATGC GACCCGTCGA
AACCATACCA GCACCTTACA ACATATTCAG GGCTATTTTA AAAAGCATTT GAATAAGGAA
CAGAAGTTAG AACTGTCTGA AATGATTATG AAATATCGCC AAGGGCTTCT CCCTTTGCTG
GTGCCTATCA CTTTGATTAA CCACTATTTG CGCCAATTTC CCACCCCCTA TATTGAGGAT
CAAGTGTACT TAAATCCCCA TCCTGAGGAA TTAAAGCTGC GCTATGCCTA TTAA
 
Protein sequence
MYKFNPQRIQ IGISACLLGE KVRFDGGHKN SSYCNQEIAP FFDYVPLCPE MAIGLGAPRK 
SIRLVRDGEQ IRVQSGDGSL DVTDKLNRFS EQKVEELGFL GGYLLCAKSP TCGMKRVTEY
KIGTNNGTKS GIGVFARKLM ERYPYLPVEE EGRLHDMVLR ENFFTRVYAY HDWHKMCHEG
LTKHKLVKFH SRYKYLLMAH SPKWYRELGP IVANIEDLDQ TAERYFAGFM TALKINATRR
NHTSTLQHIQ GYFKKHLNKE QKLELSEMIM KYRQGLLPLL VPITLINHYL RQFPTPYIED
QVYLNPHPEE LKLRYAY