| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1161 |
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| Symbol | |
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| ID | 4251445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1367338 |
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| End bp | 1368567 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117742 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_733298 |
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| Protein GI | 113969505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTA GCGCGCTTTC CCTACATTCT CAGTTAGTGA ATACCTTAGC CGAACTTGGC
TATCAGCAGC CCACGCCTAT CCAAATTGAA GCCATTCCCG CTATTTTGGC AAAACAGGAT
GTGATGGCGG GTGCACAAAC GGGAACAGGG AAAACCGCAG CCTTTGCTCT CCCGGTTTTG
CAGCAATTAC TCCTCGATAA CCAAAGCCAA GATGCACCTA AGGATATTCG AGCCCTAGTG
CTAGTGCCGA CTCGTGAGTT AGCGGTGCAA GTGCAGCAGA GTTTTGGGAA ATATGCCAAA
GGCACTGACA TTCGTATCGG GATTGCCTAC GGCGGCGTGA GTATCGAGGC TCAGCAAGCC
GAATTTAAGG CCGGCATCGA TGTGCTTATC GCGACGCCTG GGCGCCTGCT CGATCATCTG
CGTCAAGGTG CGCTTAACCT TAAGCATTTG AGTGTGCTGG TATTTGATGA AGCCGACCGT
ATGCTCGATA TGGGATTTAT GGATGAAATC AAAGCGGTGC TCAAGCAAGT GCCGGCGCAG
CGACAGACAC TGCTGTTCTC GGCTACCTTA GATGATTCGA TTTTCGGTTT CAGTAAAAAC
CTTTTGCGTG AGCCTAAGCT TATCGAAGTC GCGAAACGCA ATACCACGGC CGCACAGGTG
GAGCAGCGGG TTTATGCCAT CGACAGTGAT CGTAAAACCG AGTTTGTCAG CCATTTAGTA
CGCAGTAAAA ATTGGCAGCA AGTGCTGATC TTTAGCCGCA CAAAGCAGGG TGTCGATAAG
CTGACTACTC AGCTTAATCA ACTCGGGGTG GCAACGCAGG CATTTCACGG TGACTTATCC
CAAGGCGCAA GGGAGAAGGT TTTAAAGGAT TTTAAACAAG GACTAGTGCA GGTTTTAGTC
GCGACCGATG TTGCCGCTCG TGGCCTCGAT ATTGCCGACT TACAGTATGT GATTAACTTC
GAACTGCCCT TTATTGCCGA AGATTATATC CATCGTATCG GTCGCACTGG GCGTGCGGGT
AGCACTGGTT TGGCGATTAC GCTCTTTAGC CAAGAGGATG CACTGCTGCT TGAAGAGGTT
GAAGCATTGC TCGATAAACG CCTGCCGCAG CAATGGTATC CCGGCTTTGA ACCTGATTTT
AATAAGATGG AACCCGAGCC AAGACGCAAT AGTAAAGCGG CTCAAAAACA GCGAGCTAAG
AAGCGCGCCT TAGGTGGCAA GAAACGCTAG
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| Protein sequence | MSFSALSLHS QLVNTLAELG YQQPTPIQIE AIPAILAKQD VMAGAQTGTG KTAAFALPVL
QQLLLDNQSQ DAPKDIRALV LVPTRELAVQ VQQSFGKYAK GTDIRIGIAY GGVSIEAQQA
EFKAGIDVLI ATPGRLLDHL RQGALNLKHL SVLVFDEADR MLDMGFMDEI KAVLKQVPAQ
RQTLLFSATL DDSIFGFSKN LLREPKLIEV AKRNTTAAQV EQRVYAIDSD RKTEFVSHLV
RSKNWQQVLI FSRTKQGVDK LTTQLNQLGV ATQAFHGDLS QGAREKVLKD FKQGLVQVLV
ATDVAARGLD IADLQYVINF ELPFIAEDYI HRIGRTGRAG STGLAITLFS QEDALLLEEV
EALLDKRLPQ QWYPGFEPDF NKMEPEPRRN SKAAQKQRAK KRALGGKKR
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