Gene Shewmr4_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1158 
Symbol 
ID4251442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1360600 
End bp1361667 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID638117739 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_733295 
Protein GI113969502 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.704558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG AACATGCAGC GAATTCCGTG GGTAATTTAT TCGATACCTA CACACTTAAT 
GACACTATTA CCTTAAAAAA CCGTATTTTA ATGGCGCCAT TAACGCGCTG TATGGCCGAT
GCGGATTTAG TACCGACCGA TGACATGGTG GCTTACTATG CTCGCCGCGC CGAAGCGGGA
TTGATTATCT CCGAAGCGAC GATCATTCGC CCTGATGGTC AAGGTTACCC AAATACGCCC
GGCATTTTTA ATCAAGCGCA GATCGCCGGT TGGCGTAAAG TGACGGATGC TGTGCATGCC
AACGGCGGCA AGATTTTTGT GCAGTTATGG CATACTGGCC GTGTCGCGCA CCCACATTTC
TTCGGTGGCG GCGATGTACT GGCGCCTTCG GCTGAAAAAG TAGAGGGCAG TGTGCCCAGA
ATGCGTGAGC TGACCTATGT CACTCCAAAA GCGGCAACTC TTGAAGATAT TCAGGGTTTA
GTCCGCGATT ATGCGAAAGC GGCCGAAAAC GCGATTGAAG CCGGATTCGA TGGGGTTGAG
ATCCACGGTG CAAACGGATA TTTAATCGAT GCATTCTTAC ACCATGACAG CAACCGTCGT
ACCGATGAAT ACGGCGGCAC ACCGGCCAAT ATGTCACGCT TTGCCTTAGA AGTGGTTGAT
GCGATTGCGG CGCGTATTGG TAAAGACAGA ACCGGTCTTC GAATTTCTCC CGGCGCCTAT
TTCAATATGG CTGTCGATAA CCGTGACCGC GCCGTGTTTG ATTACCTGTT ACCTGAGCTC
GAAAAACGTG AACTGGCCTT TGTGCATATC GGTATCTTCG ACGACAGCAT GGAGTTTGAT
TACTTAGATG GCCGTGTTTC TAGCTATGTG CGTGCTAACT ATGGCAAAAC CTTAGTGGGT
GTAGGTGGTT ACAGCGCCCA ATCGGCAAGT GAAGCGATTG CCGCCGATAA GTTTGATTTA
ATTGCGATTG GTCGTCCCTT TATTGCCAAC CCAGATTATG TGGCAAGAGT GCGCCAAGGT
CATGAATTGG TGACCTATAG CGATGAAATG CTGGCAAGCT TGGTGTAA
 
Protein sequence
MTIEHAANSV GNLFDTYTLN DTITLKNRIL MAPLTRCMAD ADLVPTDDMV AYYARRAEAG 
LIISEATIIR PDGQGYPNTP GIFNQAQIAG WRKVTDAVHA NGGKIFVQLW HTGRVAHPHF
FGGGDVLAPS AEKVEGSVPR MRELTYVTPK AATLEDIQGL VRDYAKAAEN AIEAGFDGVE
IHGANGYLID AFLHHDSNRR TDEYGGTPAN MSRFALEVVD AIAARIGKDR TGLRISPGAY
FNMAVDNRDR AVFDYLLPEL EKRELAFVHI GIFDDSMEFD YLDGRVSSYV RANYGKTLVG
VGGYSAQSAS EAIAADKFDL IAIGRPFIAN PDYVARVRQG HELVTYSDEM LASLV