| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1147 |
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| Symbol | |
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| ID | 4251815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1348972 |
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| End bp | 1350654 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117728 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_733284 |
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| Protein GI | 113969491 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.366711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CTTTTTTTAG AACCCTCTCC TGGCTGCACA CTTGGGCGGG TTTGCTCGTG
TGCTGGGTAT TACTGCTGAT CTTTTTTGCT GGTAGCCTGA GTTATTTCCG CCATGAAATG
AGCCTGTGGG CCGAGCCAGA ACTCCACCGC GGCGCCTTTC AAGACTATCA AACGAATCAA
GTAGCGACTC AGCTTGACCA AGGTCAAGAC TACATTGAAG CGCATTCCGC GGCGGCAACC
CAACGCTGGT TAATCAATTT CCCAACCGAT AGAAGCCCCA TGCTGAGCTT TGCGTGGCAA
CTGCCGCCTG AAAAGGGTCA ACGCCGAGGC AAAATCGAGC AGCATGTCAC CAAGGCCGAT
GGCAGTGGCA TGATCACCGA TGTCCGCGAC AGCCGCGGCG GTGACTTCTT CTACCGTTTA
CATTTCGACC TACACTACAT GCCAGCCATT ACGGCGCGCT ACATTGTGGG TGTCTGCACT
ATGTTTATGT TAATTGCCCT TATCAGCGGC ATCGTTATCC ATAAGCGTAT CTTTAAAGAC
TTGTTTAGCT TTCGTCAGAA CAAGGGCGCT CGCTCTTGGT TAGATGCCCA TAATGTCAGC
TCTGTGATTG CCCTGCCCTA CCATTTAATG ATCACCTATA CTGGCCTCAT CACTTTAATG
CTGATCTATA TCCCATGGAC GGTAAGCACA GCTTATCCTG AGGATAATCA AGCCTTTTTA
AAAGAACTCA ATCCGGCGAG ACAAACAGAA AAAGCCTCGG GCATTCAGGC AGAGCAAGTG
CGCTTAAGCC AACTGTTGCC CCAAGTTCAG GCAGAATGGG GCGATGCACC TATCAAGCAG
GTGATTGTTT CCTATCCGAA AGATCAAAAT AGCCAAGTGA CCTTCTACCA AAATACCGGT
AAAGACGTCA CCGACGAATC AACACTCCTA GTGTTTAACG GTGTTACGGG TGAACTCAAG
TACGCCAGCC CCCATGAGAT GTCGGCAACC GTCGTGACCT ACGACACTAT GATGTCGCTG
CACACCGCGC GTTTTGCCGC GCCACTGCTG CGTATTTTGT TCTTCTTCTG TGGCTTACTC
GGCTGCGCCA TGGTCGCAAC GGGCACCTTA ATGTGGGCGA TTCGTCTACG CCAGAAGCAG
CAAAAGGCAA TCGATAAAGG CGAGAAAGCG AGTCGTGGTC TGCGCTTAGT CGAAGGATTA
AACTTCATGT TTATCTTAGG CTTGCCCTTA GGCGCGGCGG CATTTTTCTA TGCAAACCGC
CTACTACCAA CGGATTTTGC CGCCCGCTCA GCCTGGGAAG TACATAGCTT CTTTATCACT
TTAGGAGCGA TGGGCGTATG GGCATTTTTC GGTCGAAGCC GACGCCATTG GCAATTCGCC
TTGATGCTTA TCGGAGCGCT TTATTGCGCA CTGCCGCTGT TAAATGCGGC CACGTCTCCG
AGCCACTTAA TTGATAATAT CCGCAGCCAA CAATGGGCAC TGGTTGGGTT TGATGTGCTC
GCGCTGTTAC TGGGTTGTGC CATGCTTTTT GCGAGCACTC GACTCTCGGC CGTGGTGAAA
ACATTGCAAA AGCCGAGTCG AAAAAATACC ACAGCAGTTG AAAAAGTCAG GAGAAAACAA
CCTGAACCGA GTTATGCTAA CGAACTTGCC TCGTCGTCTC CCTTGGAGGA AGCAAAATCA
TGA
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| Protein sequence | MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEM SLWAEPELHR GAFQDYQTNQ
VATQLDQGQD YIEAHSAAAT QRWLINFPTD RSPMLSFAWQ LPPEKGQRRG KIEQHVTKAD
GSGMITDVRD SRGGDFFYRL HFDLHYMPAI TARYIVGVCT MFMLIALISG IVIHKRIFKD
LFSFRQNKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVST AYPEDNQAFL
KELNPARQTE KASGIQAEQV RLSQLLPQVQ AEWGDAPIKQ VIVSYPKDQN SQVTFYQNTG
KDVTDESTLL VFNGVTGELK YASPHEMSAT VVTYDTMMSL HTARFAAPLL RILFFFCGLL
GCAMVATGTL MWAIRLRQKQ QKAIDKGEKA SRGLRLVEGL NFMFILGLPL GAAAFFYANR
LLPTDFAARS AWEVHSFFIT LGAMGVWAFF GRSRRHWQFA LMLIGALYCA LPLLNAATSP
SHLIDNIRSQ QWALVGFDVL ALLLGCAMLF ASTRLSAVVK TLQKPSRKNT TAVEKVRRKQ
PEPSYANELA SSSPLEEAKS
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