Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1134 |
Symbol | |
ID | 4251802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1334762 |
End bp | 1335211 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638117715 |
Product | cytochrome c, class II |
Protein accession | YP_733271 |
Protein GI | 113969478 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000245313 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT TACTCCTGAC TCTCGTTGCC GGTACCTTAT TGGCTTCAAC TGCACAAGCA CACAATTTTG AAGATGCAAA GGACGCGATT GAATATCGCC AATCTGCATT TGGCCTGATT GCTTATAACT TTGGCGATAT GGGCGCTATG ATGAAAGGCA AGAAACCTTT CGAAGCTGAA ACCTTCGCAA TGCGCGCCAA CAATGTCGCT GCTCTTTCAC ACATTCCTTT CGAAGGCTTT ATTGAAGATT CAGATAAAGG CGATACCGAA GCGCTAGCCA AAGTATGGCA AGACAAGGCT GACTTCGACG CTAAGATGAA AACCTTCCAA GAAAATGCCG CTATTTTAGC GACTGTGGCT CAAAAAGGTG ACCAAGCTGA AATCAAGCAA GCCTTTATGA ACACTGGCAA GAGCTGTAAA GGTTGTCACG ACGTTTACAA AAAAGACTAA
|
Protein sequence | MKKLLLTLVA GTLLASTAQA HNFEDAKDAI EYRQSAFGLI AYNFGDMGAM MKGKKPFEAE TFAMRANNVA ALSHIPFEGF IEDSDKGDTE ALAKVWQDKA DFDAKMKTFQ ENAAILATVA QKGDQAEIKQ AFMNTGKSCK GCHDVYKKD
|
| |