Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1129 |
Symbol | |
ID | 4251797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1327046 |
End bp | 1327243 |
Gene Length | 198 bp |
Protein Length | 65 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638117702 |
Product | carbon storage regulator |
Protein accession | YP_733266 |
Protein GI | 113969473 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000102923 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATTT TGACTCGTCG TGTTGGCGAA ACACTGATGA TTGGTGATGA AGTCACAGTT ACAGTGCTAG GGGTAAAGGG CAATCAAGTG CGTATTGGTG TGAATGCACC AAAAGAGGTT TCTGTCCACC GTGAAGAAAT CTATCAGCGC ATTCAATCTG AAAAATCAGG TACACCTTCT GAAGGTGGTA ACTTTTAA
|
Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQSEKSGTPS EGGNF
|
| |