Gene Shewmr4_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1102 
Symbol 
ID4251070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1292727 
End bp1293221 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID638117675 
Productphosphatidylglycerophosphatase 
Protein accessionYP_733239 
Protein GI113969446 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0459736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.578587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGT TATCCCAAGA TCAGGCGCTG TCGCGCCTGT CTCTTAAAAA TCCAATCCAT 
TTTTTAGCAT TAGGCTTTGG CAGTGGTTTA GCGGCTAAGG CACCTGGCAC CTTTGGCACT
TTGGCGGCGA TTCCTCTGTA TTTGCTGTTG GCTCAATTGC CCTTGGCTTG GTATTTAGCT
GTGACCTTAG TGTGCGTGTT CGCGGGGATT TATATCTGCG ATAAGGCGGC TAAAGACATG
GGCGTGCATG ACCATGGCGC GATTGTATGG GATGAGGTCG CAGGCCTGTT AATCACTATG
ATTGCGGCGC CTGCTGGAGT GCTCTGGTTA GTCGTTGGTT TTGTGCTGTT TCGTTTCTTT
GACATTATCA AGCCTTGGCC AATCCGTTGG CTCGATGCCA AGGTCGAAGG TGGCTTTGGG
ATTATGATCG ACGATGTATT AGCAGGCATT TTCGCGCTTA TTGGTGTTCA GGCCCTAGCG
GCTTTTATCC ATTAA
 
Protein sequence
MKLLSQDQAL SRLSLKNPIH FLALGFGSGL AAKAPGTFGT LAAIPLYLLL AQLPLAWYLA 
VTLVCVFAGI YICDKAAKDM GVHDHGAIVW DEVAGLLITM IAAPAGVLWL VVGFVLFRFF
DIIKPWPIRW LDAKVEGGFG IMIDDVLAGI FALIGVQALA AFIH