| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1100 |
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| Symbol | nusB |
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| ID | 4251068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1291288 |
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| End bp | 1291692 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117673 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_733237 |
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| Protein GI | 113969444 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000596608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.728168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCTT CTGAGCGCCG CAAGGCCCGC CGTTTAGCCG TACAAGCCAT CTATTCATGG
CAACTAAGCG GGAATAATAT TGCCGATGTC GAGCATGAGT TTTTAACTGA ACAGAGTCTC
GATGGTGTAG ACGTAGCTTA TTTTCGTGAG CTATTTGCAG GCGTAGCAAC TAAGAAAACC
CAACTGGATG AGTTGTTCAT TCCACACTTG GACCGCCCCA TTGATGAGGT GTCGCCAGTG
GAGAAGGCCA TAGTTCGCTT AGCTGCCTAT GAGCTGACTT TCCGTAAAGA TGTGCCATTT
AAAGTCGCGA TTAACGAGGC GATTGAACTG GCTAAAGCTT TCGGTGCGGA TGAAAGCCAT
AAGTTTGTTA ATGGATTACT CGACAAACTG GTTGCACGTA AGTAA
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| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQSL DGVDVAYFRE LFAGVATKKT
QLDELFIPHL DRPIDEVSPV EKAIVRLAAY ELTFRKDVPF KVAINEAIEL AKAFGADESH
KFVNGLLDKL VARK
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