| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1090 |
|---|
| Symbol | |
|---|
| ID | 4251058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 1280462 |
|---|
| End bp | 1281361 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638117663 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_733227 |
|---|
| Protein GI | 113969434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAT TGAATAACCT GAGCTTGGCC AGCTTCAAAC CCCAATTCGC CGCTGCAATG
CTTGTGGCAG GAATGGCTAC GGCGCAGGCC GCACCTTTGC AAGTGAGCCA TTTTAATCCG
GGTGAAAACA GCATCTTTGC CGTGTCCTCC AGCTTTATCA GTGGCGAGCA TGAAATGATG
TTGGTCGATG CTCAGTTCCA AAAAAATGAT GCCCAGACCT TAGTGGATAC CATTAAGGCC
AGCGGTAAAA AACTCACCTT GGTTTATATC AGCCACAGCG ATCCAGACTT TTACTTTGGG
TTGGATGTGA TTAAGCAAAA CTTCCCCGAG GTAGAAATCG TCGCCACCCA AACCACTGTC
GATGATATTA AAGCCTCGAT GGAGGGCAAG CTTGCCTACT GGGGACCGAT TTTAAAGGAC
AATGCGCCGA GCCAATTAGT GCTGCCAAAG GTGGTGACAA CCAATAGCTT TAGTATCGAC
GGTGAACAAG TGCTGATTGA AGGTCTAGAG GATACTCACC CTAAGCATAC CTTCCTGTGG
GTACCTTCGG CTAAGACCAT CACTGGCGGA GTTGAAGTAT TTGATAATAC CCATGTTTGG
ATAGCTGATA CCCAAAGTAT CGAGTCTCAC CAGGCTTGGT TAGCCCATTT GGATAAAATG
AGTGCCCTCT CCCCCGAAAC AGTGATCCCT GGCCATTATC TTGGCAAGGC AAGATTTGAT
CAGCGCGCGA TTAGCTTTAC CCGCGACTAT ATTCATGCCT TTGAAAATGC AGCTAAAACA
GCAAAAAATT CTGCGGACTT AATCGCCAAG ATGCTTGCAC TCTACCCACA AATCCCCAGC
GATGTGGGCC TTGAGATCAG CGCTAAAGTC ATTATGGGCG AAATGCGCTG GCCCATGTAA
|
|---|
| Protein sequence | MTLLNNLSLA SFKPQFAAAM LVAGMATAQA APLQVSHFNP GENSIFAVSS SFISGEHEMM
LVDAQFQKND AQTLVDTIKA SGKKLTLVYI SHSDPDFYFG LDVIKQNFPE VEIVATQTTV
DDIKASMEGK LAYWGPILKD NAPSQLVLPK VVTTNSFSID GEQVLIEGLE DTHPKHTFLW
VPSAKTITGG VEVFDNTHVW IADTQSIESH QAWLAHLDKM SALSPETVIP GHYLGKARFD
QRAISFTRDY IHAFENAAKT AKNSADLIAK MLALYPQIPS DVGLEISAKV IMGEMRWPM
|
|---|
| |