Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1086 |
Symbol | |
ID | 4250791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1273851 |
End bp | 1275017 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117659 |
Product | metallophosphoesterase |
Protein accession | YP_733223 |
Protein GI | 113969430 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0953026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.926855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACATAC TCTCCGAACG AGGCGTCAAT CACATGAAAT GCCCATCACA GGATGTGTTT TCATCCGCAT CGACCAAAAA ACGCAGCACT ATCGCCGCTC ATGGAGCCTT GCTCTCTCTG CTCAGCTTAT TTTCCGTTGC CACCTATAGT GCAGAGCCAA GCCCAACAGC ATCGGCCGTA ACAGATGGTC CCTATGTGTT TCTCGATCAG GGACAAGAAA ATACCGCCTA TTGGATCTGC CAGAGTGAAT TAAAACAAAC CCCTATCGCA AACAACCAAT TAGCCCGCCC TAGCGATTGC GGTAACTTGC CACAACCAGT ACGTCATAAC GAGGCGCCTC AGGTTGAAGC CGATACTTAT ACCCATGCGG GTAAAATTGT GGCCCTGAGC GATGTGCATG GCCAATTCGA TGTGATGATT AACTTGCTTA AAGCGCACAA GATTATCGAT GACCAACATC ATTGGGCCTT TGGTGATGGC CATATGGTGA TGACGGGCGA TATGTTCGAC CGCGGTCATC AAGTGAACGA AGTTTTGTGG TTTTTATATG AGCTAGATAA AGAGGCCCAA GCCGCTGGTG GTCGTTTACA TCTACTCATG GGCAATCACG AACAAATGGT GTTTCGCGGC GACTTACGTT ATGTGAACGA ACGTTATCAA ACCTCCGCGC AACTACTCAA CCGCAGCTAT GATGCACTCT ACAACAAAGA CACCGAAATC GGCCGTTGGC TTCGCAGTAA AAACACAATG GTAAAGATTA ACAATCTGCT GTTTATGCAC GGTGGGATAA GCCCTGAATG GGTCGAGCGC AAACTCAATA TTAGCGATGC CAATCAGTTA TTTCGTCAAC ATTTAGACGA TAAAAAAGAA GATTTAAAAC AAAACGACCT GTTGAACTTT CTGTTTTTCA CTAACGGTCC CACTTGGTAC CGTGGCTACT TCAAAGATGT GCTTAACGAG CAAGAAATTG ACCAAATCCT GAACTACTTT AAGGTCGACC ATATCATTGT CGGTCATACC TCGCAGGATC GTGTTCTTGG GCTTTATCAT AATAAAATCA TCGCGATTGA TAGCAGCATT AAGAATGGTC AGTCAGGCGA ACTACTACTC ATAGAGCAAG ATAAACTCAC TCGCGGTATG TATCAAGGTG AGCAAGTGCC ACTTTAA
|
Protein sequence | MHILSERGVN HMKCPSQDVF SSASTKKRST IAAHGALLSL LSLFSVATYS AEPSPTASAV TDGPYVFLDQ GQENTAYWIC QSELKQTPIA NNQLARPSDC GNLPQPVRHN EAPQVEADTY THAGKIVALS DVHGQFDVMI NLLKAHKIID DQHHWAFGDG HMVMTGDMFD RGHQVNEVLW FLYELDKEAQ AAGGRLHLLM GNHEQMVFRG DLRYVNERYQ TSAQLLNRSY DALYNKDTEI GRWLRSKNTM VKINNLLFMH GGISPEWVER KLNISDANQL FRQHLDDKKE DLKQNDLLNF LFFTNGPTWY RGYFKDVLNE QEIDQILNYF KVDHIIVGHT SQDRVLGLYH NKIIAIDSSI KNGQSGELLL IEQDKLTRGM YQGEQVPL
|
| |