| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1081 |
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| Symbol | |
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| ID | 4250786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1266160 |
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| End bp | 1266927 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117654 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_733218 |
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| Protein GI | 113969425 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTA TTCAACCCGA GCAGCAATTT AATCCCGATG CCTTAGACAA CCTAGTGATA
GGCATTGCCG CCGAAATTGG CGAACATGAC TCAGGCGTAC ATCAGCATCG CAAGGCTCAG
CTGCTCTACT CATCGGCGGG ATGTATGCGG TTTACCTTAG CCGATACTCA AGTCGTATTG
CCGCCAACCC GTGCAGCTTG GCTGCCCGCA GGTGTGGTAC ACCAAGTCAC AATGCGCGAT
GTAGTGGCCT ATCGTTCACT CTACTTTGAG CCTGAAACCG TGGCGTCTTT GCCGGATAAC
GTCACGATTT TCCATGTGAA TCCGTTACTC AAAGCGTTAA TCGACACTAT GTCCTTTTGG
CCTTGGGACA AATCCAGACA CAGCCAGCAC AATGCCTTTG CCCTGCTGAT TGAAGAGTTA
CTCCATGCGG ATGCACAGAA TTTAAGCTTA CCCCTGCCCA AGGACAAACG GCTGCAGAAC
TGGCTTAAGC AATTGCAACA ACAGCAAAAA ATCCCCGCCA GCTTGCAAGA CATGGCCATT
GAAATCGGCG CCAGCGAACG CACCATCAGC CGTATTTTTA GCAACGAAAC GGGCATGGCT
TATCAGGCGT GGCGGCAGCA ATGGCGCTTG CTATCAGCTA TTGAGCAATT AGCTGCGGGC
GCCTCGGTGG CGCAGGTAGG ATTTAACTTA CAGTTTTCCA GCGATAGCGC CTTTATCAGC
TTTTTTAAAC AATATACCGG CACCACCCCG GCGCAATATT TTAGATAA
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| Protein sequence | MAFIQPEQQF NPDALDNLVI GIAAEIGEHD SGVHQHRKAQ LLYSSAGCMR FTLADTQVVL
PPTRAAWLPA GVVHQVTMRD VVAYRSLYFE PETVASLPDN VTIFHVNPLL KALIDTMSFW
PWDKSRHSQH NAFALLIEEL LHADAQNLSL PLPKDKRLQN WLKQLQQQQK IPASLQDMAI
EIGASERTIS RIFSNETGMA YQAWRQQWRL LSAIEQLAAG ASVAQVGFNL QFSSDSAFIS
FFKQYTGTTP AQYFR
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