Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1080 |
Symbol | |
ID | 4250785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1265538 |
End bp | 1266092 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117653 |
Product | hypothetical protein |
Protein accession | YP_733217 |
Protein GI | 113969424 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGTTTT GCCTGCTCGC GCCATTCGCC GCCTTGCTGT GCTATAGTGC GCAGAGTCAC CCAACTGATA ACCATAATCC CTTGAAAAGA ATCGCCCTCT TTGTCGACGT GCAAAACATC TACTACACCT GCCGTGAGGC TTATCAGCGC CAGTTTAACT ATTGCAAACT CTGGCAACAG TTAAGCGCGC AGGGTGAGAT TGTCAGCGCC ATCGCCTACG CCATTCATCG CGGGGACGAT GGCCAGTTAA AATTTCAAGA TGCGCTGAGA CATATTGGTT TTGAGCTAAA ACTTAAGCCC TTTATTCAGC GCAGTGATGG TTCGGCAAAG GGTGATTGGG ATGTGGGCAT CACCATAGAT GTGCTGGAAA TGGCGCCCGA GGTGGATACT GTAATCTTGC TGTCTGGCGA TGGAGACTTT GCCCTTTTGC TCGATAAGAT AAGGCAAAAA TACGCCATCG AGGCTGAGGT GTATGGCGTG CCCTCCCTCA CGGCAAAATC TCTGATGGAG GCGGCTAGCT GCTTTCATCC GATAGAAGAG TCATTGTTAC GTTAA
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Protein sequence | MQFCLLAPFA ALLCYSAQSH PTDNHNPLKR IALFVDVQNI YYTCREAYQR QFNYCKLWQQ LSAQGEIVSA IAYAIHRGDD GQLKFQDALR HIGFELKLKP FIQRSDGSAK GDWDVGITID VLEMAPEVDT VILLSGDGDF ALLLDKIRQK YAIEAEVYGV PSLTAKSLME AASCFHPIEE SLLR
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