Gene Shewmr4_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1080 
Symbol 
ID4250785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1265538 
End bp1266092 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content50% 
IMG OID638117653 
Producthypothetical protein 
Protein accessionYP_733217 
Protein GI113969424 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGTTTT GCCTGCTCGC GCCATTCGCC GCCTTGCTGT GCTATAGTGC GCAGAGTCAC 
CCAACTGATA ACCATAATCC CTTGAAAAGA ATCGCCCTCT TTGTCGACGT GCAAAACATC
TACTACACCT GCCGTGAGGC TTATCAGCGC CAGTTTAACT ATTGCAAACT CTGGCAACAG
TTAAGCGCGC AGGGTGAGAT TGTCAGCGCC ATCGCCTACG CCATTCATCG CGGGGACGAT
GGCCAGTTAA AATTTCAAGA TGCGCTGAGA CATATTGGTT TTGAGCTAAA ACTTAAGCCC
TTTATTCAGC GCAGTGATGG TTCGGCAAAG GGTGATTGGG ATGTGGGCAT CACCATAGAT
GTGCTGGAAA TGGCGCCCGA GGTGGATACT GTAATCTTGC TGTCTGGCGA TGGAGACTTT
GCCCTTTTGC TCGATAAGAT AAGGCAAAAA TACGCCATCG AGGCTGAGGT GTATGGCGTG
CCCTCCCTCA CGGCAAAATC TCTGATGGAG GCGGCTAGCT GCTTTCATCC GATAGAAGAG
TCATTGTTAC GTTAA
 
Protein sequence
MQFCLLAPFA ALLCYSAQSH PTDNHNPLKR IALFVDVQNI YYTCREAYQR QFNYCKLWQQ 
LSAQGEIVSA IAYAIHRGDD GQLKFQDALR HIGFELKLKP FIQRSDGSAK GDWDVGITID
VLEMAPEVDT VILLSGDGDF ALLLDKIRQK YAIEAEVYGV PSLTAKSLME AASCFHPIEE
SLLR