| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1070 |
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| Symbol | |
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| ID | 4250775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1252518 |
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| End bp | 1253336 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117643 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_733207 |
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| Protein GI | 113969414 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000162274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTTT GCAGCCCAAC AAGGAATGAA TTTCAGCGAG TAATAAATAA CCCGCTGACG
TTGTTGACTG CGGCTTGCCT ATTTTTATTC TCTGCCACAA CCCACTCCTC CTTTGCCCAA
GAAAGCCAAA GTAACCCACA AGCCGTAGGA CATAGCATCA CCTTAGCCGC CGAAGACAGC
TGGCCGCCGT TCGCCAATCA GTTTGGCCAA GGGATCTCCC ATCGCCTTAT CGCGGCGGCA
TTCAAGCAAT CTCAAGTGGA AGTCAACAGC CTAGTCGTGC CCTATAGCCG CGCCCTTATG
ATGGCCGAAA AAGGTGCCGT CGATGGAGTC TTTAACGTGA CCCGCGAAGC GAGTACTGAG
CAACGTTTTG TGTTTGGTAA CACGCCGCTA TTTGTGGCGA AAGCCTCTTT TTATCAACGC
AAACAACGCC CGCTCATCGC CGCCAATAAA TGGGAAATTC CCAAAGGCAG CATAGTCGGG
GTCATAAAAA GTTATGAGTA TGGCGATGAG TTTCCCGAAC TGGTGAAACA GCGCCAACTG
AATGTCATCA CGGTCGCCAA CCAACAGCAA CTGATTAATC TGTTGATGAT TGGCCGAATC
GATGCGGCGG TCATGTTCGA CTTAGTCGCA CAGGAAAACC TGCAAAAAAT GGGCGTCAGT
GACGATGTGA TCCCCGCCTT TAATAACCAT AGCAGCGAGA TTTATCTGGC CTTTTCGAAG
GAAAACCCCA AAGCCGCACA ACTCGCTAAA GAGCTGGATC TGGGCTTAAC CCAGTTAAAA
GCCAATGGAC AGTATCAACA ACTGCTTAGC ACTAAGTAA
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| Protein sequence | MRVCSPTRNE FQRVINNPLT LLTAACLFLF SATTHSSFAQ ESQSNPQAVG HSITLAAEDS
WPPFANQFGQ GISHRLIAAA FKQSQVEVNS LVVPYSRALM MAEKGAVDGV FNVTREASTE
QRFVFGNTPL FVAKASFYQR KQRPLIAANK WEIPKGSIVG VIKSYEYGDE FPELVKQRQL
NVITVANQQQ LINLLMIGRI DAAVMFDLVA QENLQKMGVS DDVIPAFNNH SSEIYLAFSK
ENPKAAQLAK ELDLGLTQLK ANGQYQQLLS TK
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