| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1064 |
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| Symbol | |
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| ID | 4250769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1245464 |
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| End bp | 1246828 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117637 |
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| Product | peptidase U32 |
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| Protein accession | YP_733201 |
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| Protein GI | 113969408 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC CTGAGTTGTT ATCTCCCGCT GGGACGCTGA AAAACATGCG TTACGCTTTT
GCCTATGGTG CAGATGCCGT GTATGCCGGC CAGCCGAGAT ACAGCCTGAG GGTTCGTAAT
AACGACTTTA AAATGGAAAA CCTCGCGACG GGTATCGAAG AAGCCCATGC GTTGGGTAAA
AAGCTTTATG TGGTGAGTAA CATTGCTCCC CACAACGCCA AGCTCAAAAC CTATATCAAA
GATATGGAAC CGGTAGTGGC GATGAAGCCC GATGCGCTGA TCATGTCAGA TCCTGGCCTT
ATCATGATGG TACGTGAGGC CTTCCCTGAG CAGGTGGTGC ATTTATCGGT GCAAGCCAAC
GCCATTAACT GGGCATCGGT CAAATTCTGG CAGACCCAAG GCATTAAACG GGTAATTTTA
TCCCGCGAAT TATCCTTAGA TGAAATCGAA GAAATCCGTC AACGCTGCCC CGATATCGAA
CTAGAAGTGT TTGTCCACGG CGCCCTGTGT ATGGCTTACT CTGGCCGTTG TTTACTGTCG
GGTTATATCA ATAAGCGCGA TCCAAACCAA GGCACTTGCA CTAACGCCTG CCGCTGGAAA
TACGATGTGC ACGAAGCGCA GCAAACTGAC TCTGGCGATA TCATTGCCAC CCCCAATGCG
GTGCAAATCG AGACGCCAAC CTTGGGCACG GGTCCTGCGA CCGACCAAAT CTTCCTGCTG
CAAGAAGCCA ATCGCCCCGG CGAATATATG CCAGCGTTTG AAGATGAGCA TGGCACTTAT
ATCATGAACT CTAAGGACTT GCGCGCAATC CAACACGTTG AGCGTTTGGC GAAAATGGGC
ATCGACTCGC TGAAGATCGA AGGCCGTACT AAGTCGTTCT ACTATGTTGC CCGTACCGCC
CAGCTATACC GTCAGGCCAT CGACGATGCC GCCTCAGGCA AGAGCTTCGA TCGCAGCCTG
ATGAACCAAC TCGAAGGCTT AGCACACCGC GGCTATACCG AAGGTTTCTT ACGTCGCCAC
GTACATGATG AATATCAAAA CTACGACTAT GGCTACTCGG TCAGCGATAC CCAACAATTT
GTGGGCGAAT TAACCGGTAA ACGCAATCTG GCTGGCCTTG CCGAAATCGA AGTGAAGAAC
AAATTCTCTG TCGGTGATAG TGTTGAATTA ATGACGCCAC AGGGCAATAT CAGCCTCACC
ATCGAGCAAC TCGAGAACCG CAAAGCCGAA TCGGTTGAAG CGGGATTAGG TTCGGGCCAT
ACCGTTTACT TGCCCGTGCC GAAAGAGGTT GATCTGAACC ACGGCATTTT ACTGCGTAAC
CTGCCCCAAG GTCAGGATAC CCGTAACCCA CACGAAGCAG GCTAA
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| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMENLAT GIEEAHALGK
KLYVVSNIAP HNAKLKTYIK DMEPVVAMKP DALIMSDPGL IMMVREAFPE QVVHLSVQAN
AINWASVKFW QTQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWK YDVHEAQQTD SGDIIATPNA VQIETPTLGT GPATDQIFLL
QEANRPGEYM PAFEDEHGTY IMNSKDLRAI QHVERLAKMG IDSLKIEGRT KSFYYVARTA
QLYRQAIDDA ASGKSFDRSL MNQLEGLAHR GYTEGFLRRH VHDEYQNYDY GYSVSDTQQF
VGELTGKRNL AGLAEIEVKN KFSVGDSVEL MTPQGNISLT IEQLENRKAE SVEAGLGSGH
TVYLPVPKEV DLNHGILLRN LPQGQDTRNP HEAG
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