Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1062 |
Symbol | |
ID | 4250767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1244587 |
End bp | 1245123 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117635 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_733199 |
Protein GI | 113969406 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTG TTTTTTCAGC TAATCTTGCA AAACAACTGC TCGAACTCAC CCCAAAACTG ATCCGTTTGC CACTCTCCAA AGTGCCCTTT AGCCTCAAGG CCAAGGTGCT TAGCCAACTC TTAACACAGC TGCTGGCGCC GCAGGCCGAA GATGGCGAGT TAGCTTTCTT GGCGGACAAG TGGGTTGCGA TTCGGGTTGA AGATTTAAAT CTGTATTTTG AAGTGAGTTT CGATGGCCGT TGGCAGGTGC GTGAGCTGAC CGATGCCCAG GTCAGCTTTA GTGCCAATTC CGCCGAGCTC TTATTGGTCG CTGCGGCAAA AGAAGACCCT GATACACTGT TTTTCCAACG TAAACTGAGC ATTGAAGGCG ATACCGAGTT AGGGCTTGAG GTGAAAAATC TGCTGCTGAG TATCGAGTTT GCCAGCCTGC CGACACCCAT TCGCTTAAGC GTTGAAAAGC TGGCCGATGC CATTGTGCGT TTGCAGCTTG AGGCAAAACC GACGGTGATT TTGGCTAAAT CCCCAAGCTT AAGCTGA
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Protein sequence | MSAVFSANLA KQLLELTPKL IRLPLSKVPF SLKAKVLSQL LTQLLAPQAE DGELAFLADK WVAIRVEDLN LYFEVSFDGR WQVRELTDAQ VSFSANSAEL LLVAAAKEDP DTLFFQRKLS IEGDTELGLE VKNLLLSIEF ASLPTPIRLS VEKLADAIVR LQLEAKPTVI LAKSPSLS
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