| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1061 |
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| Symbol | |
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| ID | 4250766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1243447 |
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| End bp | 1244448 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117634 |
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| Product | peptidase U32 |
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| Protein accession | YP_733198 |
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| Protein GI | 113969405 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTGT TGTGTCCAGC AGGAAACCTG GCCTCGCTAA AGTCGGCGCT GCAGGCCGGA
GCCGATGCTG TCTACCTTGG GTTAAAGGAT GATACCAATG CACGTTCATT CGCGGGCTTA
AACTTCACCC CCGCAAAATT ACAGGAAGCC GCCGATTTGA CCCATCAGCG GGGCAAGAAA
ATCTTCCTCA CTTTAAATAC CTTTCCTAAG CCGAATGAGG AACACCGCTG GTATCAAGCC
ATCGACTTGG CGGCCAGTAT TGGGGTCGAT GCCTTAATCG TCGCCGATCT GTCACTACTC
GACTATGCCC ACAGGCAATA TCCGCATATT CCGCTGCATT TATCGGTACA GGCGAGCGCC
ACCAACTTGG GCGCGCTGAG CTTTTATAAA GAGGCTTTTA ATATCGCGCG GGTGGTATTA
CCCAGAGTGC TGTCGATGAA ACAAGTGCGC GACCTCGCTA AGGTCAGCCC AGTCGATTTA
GAGGTCTTTG CCTTTGGCAG CCTGTGCATT ATGGCCGAAG GCCGCTGCCA CTTATCCTCC
TATGTCACTG GCCAATCGCC AAATACTGGC GGCTCTTGCT CGCCAGCGAA ACACGTGCGC
TGGCAGGAAC AGGGCCAAGA CAGATTGACT CGCCTCAACG AAGTCTTGAT TGATAAGTCA
GGGCTCGATG AACAAATGGG TTACCCCGTC GTCTGTAAAG GCCGTTATCT CACCCAAGAC
GATGATAAAC CGCAATATCT GCTCGAGTCT CCCACCAGTT TAAATACCCT TAGCCTGCTG
CCTGAGCTTG CCAAAGCGGG AATAGTGTCA CTCAAGATTG AGGGGCGTCA GCGCAGCCCT
GCCTATGTGG AGCAAGTGAC CAAGGTTTGG CGTCAAGCGA TTGATACTTA CCTTAATAAT
CCAGATAAAT TCCAGACTCA GGCCCATTGG GAGCAAGCCC TCGCGAAAGT CTCCGAAGGC
CAAATTACCA CCTTAGGCGC CTACGAGCGT GACTGGCAAT AG
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| Protein sequence | MELLCPAGNL ASLKSALQAG ADAVYLGLKD DTNARSFAGL NFTPAKLQEA ADLTHQRGKK
IFLTLNTFPK PNEEHRWYQA IDLAASIGVD ALIVADLSLL DYAHRQYPHI PLHLSVQASA
TNLGALSFYK EAFNIARVVL PRVLSMKQVR DLAKVSPVDL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPAKHVR WQEQGQDRLT RLNEVLIDKS GLDEQMGYPV VCKGRYLTQD
DDKPQYLLES PTSLNTLSLL PELAKAGIVS LKIEGRQRSP AYVEQVTKVW RQAIDTYLNN
PDKFQTQAHW EQALAKVSEG QITTLGAYER DWQ
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