| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1054 |
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| Symbol | |
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| ID | 4250759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1233041 |
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| End bp | 1234393 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117627 |
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| Product | xanthine/uracil/vitamin C permease |
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| Protein accession | YP_733191 |
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| Protein GI | 113969398 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2252] Permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.40133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGC AATTGAGTTC AACAGCCGTA CCCTCTGGTT CGTTTCTGGA CCGTTATTTT
TCAATTCAAC AACGTGGTAG CACAGTTCGC CAAGAAGTGA TCGCAGGGTT AACCACCTTC
CTCGCTATGG TGTACTCAGT GATTGTGGTA CCCAATATGT TAGGCAAAGC GGGATTCGAT
CCCGGCGCCG TGTTCGTCGC CACCTGTTTA ATTGCCTCCT TTGGCTCGCT GCTGATGGGA
CTCTGGGCAA ATCTCCCCAT GGCCATTGGT TGTGCGATTT CACTCACCGC CTTTACCGCC
TTCGGCTTGG TGTTAGGTCA GGGCATGAGT ATCCCTGTGA CCTTGGGCGC TATCTTTTGG
ATGGGCGTGA TTTTTACCGT CGTGAGTGTC ACGGGCGTGC GTCAATGGGT GCTGGCTAAC
CTACCGAAGG GGATTGCCCA TGGTACAGGT ATAGGTATTG GCTTGTTTTT ACTCTTAATT
GCCACTAACA GTGTGCAGTT GATTGTGGCC AACGACGCGG GTCTGCCAGT GAAGTTAGGC
GACATTAACA GCCTGCCCGT TATCGCCACC GTACTGGGGT TAGCGGCCAC TATCGGTTTA
GAGCGTCGCG GCGTACCCGG CGGGATTTTA CTGGTGATTA TTGGCCTATC CCTGTTTGGT
TTAGTGTTTG ATCCAAGCGT GACATTCCAA GGTTTCTTCG CCGTGCCTGA TTTTACCTCT
GAGCACTCGC TGATTGGCCA AATGGATATT ATGGGCGCCT TGAATCCTGT GGTATTACCG
ATTGTGCTGG CGCTGGTGAT GACGGCGATT TTTGATGCCA CGGGCACCAT CCGCGCGGTG
GCAGGGCAAG CCAATCTGCT GGATAAAGAC GATAATATCG TCGGCGGTGG CAAGGCGCTG
ACCTCGGATT CGGTCAGCAG CATGTTTGCG GGGATCGTTG GTGGCGCCCC TGCGGCCGTG
TATATCGAAT CGGCGGCGGG TACGGCGGCG GGCGGTAAGA CAGGTTTAAC CGCGACCATA
GTGGGCGGAT TATTCCTGCT GATGGTGTTT TTAGCGCCGC TCAGCTATTT AGTGCCAGCC
TATGCTACGG CGCCTGCGCT GATGTATGTG GGGCTATTGA TGCTCAGCAA TGTGACTAAG
TTGGACTTTA ACGACAAGGT CGATGCGATG GCGGGATTAA CCTGCGCCGT ATTCATCATC
CTCAGCTGTA ACATTGTGAC CGGTATTATG CTCGGCTTTG TGACCTTAGT GGTTGGCCGC
ATTTTTAGCG GTGAAATCCG TCAGCTTAAG TTAGGCGTGC TCGCTATTAC GCTGGGCCTT
GTGGCCTTCT ATATGGGCGG CTGGGCAATC TAG
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| Protein sequence | MSEQLSSTAV PSGSFLDRYF SIQQRGSTVR QEVIAGLTTF LAMVYSVIVV PNMLGKAGFD
PGAVFVATCL IASFGSLLMG LWANLPMAIG CAISLTAFTA FGLVLGQGMS IPVTLGAIFW
MGVIFTVVSV TGVRQWVLAN LPKGIAHGTG IGIGLFLLLI ATNSVQLIVA NDAGLPVKLG
DINSLPVIAT VLGLAATIGL ERRGVPGGIL LVIIGLSLFG LVFDPSVTFQ GFFAVPDFTS
EHSLIGQMDI MGALNPVVLP IVLALVMTAI FDATGTIRAV AGQANLLDKD DNIVGGGKAL
TSDSVSSMFA GIVGGAPAAV YIESAAGTAA GGKTGLTATI VGGLFLLMVF LAPLSYLVPA
YATAPALMYV GLLMLSNVTK LDFNDKVDAM AGLTCAVFII LSCNIVTGIM LGFVTLVVGR
IFSGEIRQLK LGVLAITLGL VAFYMGGWAI
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