Gene Shewmr4_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1053 
Symbol 
ID4250758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1232353 
End bp1232523 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content50% 
IMG OID638117626 
Productperiplasmic nitrate reductase NapE 
Protein accessionYP_733190 
Protein GI113969397 
COG category 
COG ID 
TIGRFAM ID[TIGR02972] trimethylamine N-oxide reductase system, TorE protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGC CCACTATGCA AACATCGGAT AAGTCCTCAC GCAGCAATGA GTTAAAGGCG 
CTGGGATTCA TCATTTTCAT ACTCTTTCCC GCACTGACTG TCGCGGGGAT CAGTCTCTAC
GGTTTCATCA TTTGGATGAT CCAAGCCTTC GGCGGCGTTG TCGGCCACTA A
 
Protein sequence
MTKPTMQTSD KSSRSNELKA LGFIIFILFP ALTVAGISLY GFIIWMIQAF GGVVGH