| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1051 |
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| Symbol | |
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| ID | 4251124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1228643 |
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| End bp | 1231132 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117624 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_733188 |
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| Protein GI | 113969395 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA GAGACTTTTT AAAAGGCTTA GCCTCAACCT CTTTCGTTGC TTTAGGTGGC
AGCTCAGTGT TAGCGCCCTT AAATGCGCTG GCCAGCACGG GCTTAAATGA AGACGAATGG
CTGACCACGG GCTCACACTT TGGCGCCTTT AAAATCAAAC GTAAAAACGG TGTGATTGCC
GAGGTCAAAG CCTTCGATTT AGATAAATAT CCAACGGATA TGATTAACGG TATCCGCGGT
ATGGTCTATA ACCCATCTCG CGTGCGTTAC CCTATGGTTC GCTTAGACTT TTTACTGAAA
GGCCATAAGA GCAATACCCA ACAACGGGGA GATTTCCGCT TCGTTCGCGT GACCTGGGAT
AAAGCATTAA AGCTGTTTAA ACACTCACTC GATGAAGTCC AAACCAAGTA CGGCCCATCG
GGCTTACACG CGGGGCAAAC CGGCTGGCGC GCCACTGGGC AACTGCATTC CAGCACCAGC
CATATGCAGC GTGCGGTGGG GATGCACGGC AACTATGTGA AGAAAATCGG TGACTACTCC
ACAGGTGCAG GCCAAACCAT TCTGCCCTAT GTGTTAGGTT CAACCGAAGT GTATGCCCAA
GGTACCTCTT GGCCGCTGAT CTTAGAAAAC AGCAACACTA TTGTGCTCTG GTCAAACGAT
CCATATAAAA ACCTGCAAGT GGGTTGGAAC GCCGAAACCC ATGAGGCCTT CGCTTACCTC
GCGCAGTTAA AAGAGAAGGT CAAACAGGGC AAGATCCGCG TGATCAGCAT CGACCCTGTG
GTCACCAAAA CTCAGGCCTA CCTTGGCTGT GAACAGTTGT ATGTTAACCC ACAGACTGAC
GTGACGCTGA TGCTGGCCAT CGCCCATGAG ATGATCACCC AAAAACTTTA CGATGATAAA
TTCATCCAAG GCTATAGCTT AGGCTTTGAA GAGTTTGTGC CTTACGTGAT GGGCACTAAA
GATGGTATCG CCAAAACGCC AGAGTGGGCA GCGCCAATCT GTGGGGTTGA GCCACACATC
ATCCGCGATC TGGCGAAAAC CTTAGTTAAG GGCCGCACCC AAATCATGAT GGGTTGGTGT
ATTCAGCGCC AACAACACGG TGAGCAACCT TACTGGATGG CCGCAGTCCT CGCGACCATG
ATAGGTCAAA TTGGCTTACC AGGCGGCGGC ATCAGCTATG GTCACCACTA CTCCAGTATT
GGTGTGCCTG CGACAAATGC GGCGGCGCCC GGCGCCTTCC CACGTAACTT AGACGAGAAC
CAAAAACCCC TGTTCGATAG CACCGACTTT AAAGGCGCAA GCAGCACGAT TCCCGTCGCC
CGTTGGATTG ATGCGATCCT CGAACCCGGC AAAACCATTG ATGCCAACGG TTCGAAAGTG
GTGTATCCCG ATATTAAGAT GATGATTTTC TCGGGTAATA ACCCATGGAA TCACCATCAA
GACCGTAACC GCATGAAGCA AGCCTTCCAT AAACTGGAAT GTGTGGTCAC TATCGATGTG
AACTGGACGG CGACTTGCCG CTTCTCCGAC ATAGTGCTGC CCGCCTGCAC CACCTATGAG
CGTAACGATA TCGACGTATA CGGCGCCTAT GCTAACCGCG GTATTTTGGC GATGCAGAAG
ATGGTCGAGC CGCTGTTTGA GAGTTTGTCA GACTTTGAAA TCTTCACTCG CTTTGCCGCG
CTGATGGGGA AAGAGAAAGA ATACACCCGC AATATGAGCG AAATGGAGTG GATAGAAACC
CTCTATAACG AGTGTAAAGC CGCGAACGCG GGTAAGTATG AGATGCCAGA TTTTGCCACT
TTCTGGAAGC AAGGTTATGT GCACTTTGGT GATGGCGAGC TGTGGACACG CCACGCCGAC
TTTAGAAACG ACCCTGAAAT CAATCCATTA GGTACGCCTT CTGGCTTGAT TGAAATTTTC
AGCCGTAAGA TTGAACAGTT CGGTTATGAC GACTGCCAAG GCCATCCAAT TTGGATGGAA
AAAGCCGAGC GTAGCCATGG TGGCCCAGGG TCAGACAAAT ATCCTGTGTG GCTACAATCT
TGCCATCCGG ATAAACGCCT GCACTCACAG ATGTGTGAGT CGAAGGAATA CCGCGAAACC
TACACAGTCA ACGGCCGCGA ACCCATCTAC ATTAGCCCTG TGGATGCCAA AGCGCGCGGC
ATTAAAGATG GCGATATTGT GCGCGTCTTT AACGACCGTG GCCAACTGTT AGCGGGCGCA
GTGGTATCGG ATCGCTTCCC TAAAGGCGTA GTGCGAATTC ATGAAGGCGC ATGGTATGGC
CCAGTGGGTA AAGATGGCAG CGTTGAAGGC GGCGCCGAAA TCGGTGCCCT GTGCAGCTAT
GGCGATCCAA ATACTCTGAC CTTAGACATT GGCACATCGA AGTTGGCTCA AGCCTGCTCA
GCCTATACTT GTCTGGTCGA GTTTGAGAAA TACCAAGGCA AAGTCCCTAA GGTCAGCTCC
TTCGATGGCC CTATCGAAGT CGAAATCTAA
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| Protein sequence | MNRRDFLKGL ASTSFVALGG SSVLAPLNAL ASTGLNEDEW LTTGSHFGAF KIKRKNGVIA
EVKAFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTQQRG DFRFVRVTWD
KALKLFKHSL DEVQTKYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NYVKKIGDYS
TGAGQTILPY VLGSTEVYAQ GTSWPLILEN SNTIVLWSND PYKNLQVGWN AETHEAFAYL
AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MITQKLYDDK
FIQGYSLGFE EFVPYVMGTK DGIAKTPEWA APICGVEPHI IRDLAKTLVK GRTQIMMGWC
IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPATNAAAP GAFPRNLDEN
QKPLFDSTDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ
DRNRMKQAFH KLECVVTIDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK
MVEPLFESLS DFEIFTRFAA LMGKEKEYTR NMSEMEWIET LYNECKAANA GKYEMPDFAT
FWKQGYVHFG DGELWTRHAD FRNDPEINPL GTPSGLIEIF SRKIEQFGYD DCQGHPIWME
KAERSHGGPG SDKYPVWLQS CHPDKRLHSQ MCESKEYRET YTVNGREPIY ISPVDAKARG
IKDGDIVRVF NDRGQLLAGA VVSDRFPKGV VRIHEGAWYG PVGKDGSVEG GAEIGALCSY
GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKVPKVSS FDGPIEVEI
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