Gene Shewmr4_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1046 
Symbol 
ID4251119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1222180 
End bp1222572 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content47% 
IMG OID638117619 
Producttype IV pilus assembly PilZ 
Protein accessionYP_733183 
Protein GI113969390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.314079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.218372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA AAAAAGTAGT GATTGATGAA AGACGAAAGT TCTCGCGGAT CCTCTTTGCC 
GCTAGCGCAT CGGTACACCA AGGCGATAAA CAATGGCAAA CCACCATACT CGACCTCAGC
CTAAATGGCG CACTGGTGGA CGAACCTGCC GGATTTAGCC ATTCAAGTGA GCCAATCACC
CTCAGTTTTA CCTTGCCAGG CTCGGATATT GAGCTGCAAA TGCAAACCGA GTTAGTGCAT
CAACGCAACC AACAACTAGG GCTTAAGTGC AAATTCATTG ATGTGGACAG CATCAGCCAC
CTTAAACGCA TCGTTGAGCT GAACTTAGGG GATGCTTCAA TCCTGAATCG TGAATTGGCG
CTCTTTATCG AAAAGCACAA CAGCGCAGAT TAA
 
Protein sequence
MNDKKVVIDE RRKFSRILFA ASASVHQGDK QWQTTILDLS LNGALVDEPA GFSHSSEPIT 
LSFTLPGSDI ELQMQTELVH QRNQQLGLKC KFIDVDSISH LKRIVELNLG DASILNRELA
LFIEKHNSAD