Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1046 |
Symbol | |
ID | 4251119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1222180 |
End bp | 1222572 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117619 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_733183 |
Protein GI | 113969390 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.314079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.218372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATA AAAAAGTAGT GATTGATGAA AGACGAAAGT TCTCGCGGAT CCTCTTTGCC GCTAGCGCAT CGGTACACCA AGGCGATAAA CAATGGCAAA CCACCATACT CGACCTCAGC CTAAATGGCG CACTGGTGGA CGAACCTGCC GGATTTAGCC ATTCAAGTGA GCCAATCACC CTCAGTTTTA CCTTGCCAGG CTCGGATATT GAGCTGCAAA TGCAAACCGA GTTAGTGCAT CAACGCAACC AACAACTAGG GCTTAAGTGC AAATTCATTG ATGTGGACAG CATCAGCCAC CTTAAACGCA TCGTTGAGCT GAACTTAGGG GATGCTTCAA TCCTGAATCG TGAATTGGCG CTCTTTATCG AAAAGCACAA CAGCGCAGAT TAA
|
Protein sequence | MNDKKVVIDE RRKFSRILFA ASASVHQGDK QWQTTILDLS LNGALVDEPA GFSHSSEPIT LSFTLPGSDI ELQMQTELVH QRNQQLGLKC KFIDVDSISH LKRIVELNLG DASILNRELA LFIEKHNSAD
|
| |