| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1041 |
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| Symbol | |
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| ID | 4251114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1214865 |
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| End bp | 1216085 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117614 |
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| Product | membrane protein |
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| Protein accession | YP_733178 |
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| Protein GI | 113969385 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.66781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000114763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTATATC TTAAAGGGCT AAAGAAAAGC CATAAAATCA GTAGACTGCT CCAAATCGCC
ATCGCCCTGA CCTTGATGGT CGGCTTAGTG CAATTGTGGC AGACAAGCCT ACTACAAGGT
CAGCTGCTTC TAAAGTCCCA AACGCAAAAG ATGGCCAGAT TACTGGTACA ACAAACGGCC
TACAGCGCAG CGCCCGCCCT ACAATTGCAA AACGATGAGC AGCTCCAATG GCTGGCCAGC
GCCTTAGTCG AAGATCCTAA GGTGATGTCG GCAGCCATTT TCAGCGACCA AGGTATACGC
TTAGCCTTCG CCCAAAGCCT GACCAATGAA GCCTTAGATC CCGAATCGGA AGACATGAGT
TTGCTCCTAA GCAAATATCC ACCTTATGTC GAACCCGTGA TCCAAGATGG AAAAAATTTA
GGCTATGTCG AGGTTAGACT CGATACCAAA CTATTTTTTA ATGAAATCAA AGAAGCGCAT
AACCTAAATA TGGAGCAGCA GCAAATGATG CTGCTGGTTG CCGGCCTTAT CGGCATGTTG
TTATCCCGCG CCTTGTCCTT TAAGCGCGCC GATTTTGACC GCCGTCGCAC CCGCGCCAAA
TTGCGTAAAA ACCCTAAGAA GAATAAAGCC ATAAAAGTAC CCGAAGCGGC CGAGGAAGCT
AAGCCATCGG ATAGTCAAGA TACCCAGCAG GATGCCGTTA TCGCAAGTGG CACTGAGGCA
GTGCAAAAGC CGGCAGAAGC TAAAAAGGCA AAAGAAAGCA AAGCAGAACA GGATCTCGAC
ACTCCGCTCT TGGAGAAATC GGCTGTAAGC AAGGCGCAGA ATGAAGACAG CAATCAAGCC
ATTGCCGAAT CTAAAGCGAA GAAAGCCAAA ACAAGCGCAG AAACAAAAGC TGCACTTGCG
CCAGAACCCG TATCAGAGAA AGCAGCAGAG AAAGCGCTTG ATGTGAAGCC AGAGCTTAAA
CCAGAGATAA AACCAGAGAA AGAGACCAAG GATGAGTCAT CATCTGAGCC AACGCCTCAG
TCTCAGTCTC AGTCTCAATC TAAAACGGAT ACCAGAGAAC AGGCGACTCA AGCTTCAGTC
ACCGAGGCGC CAAGCTCAAC GCCCGCGCCG AATAAACCTA AGGTTAAATC GGTGCGTCGA
GTGAAAACCA CTGCGGCGAA ATCTACCGCA GAGAAAGCCC CTGCTCAACC GAGCGATTTA
GATACCGATT CTACGGGTTA A
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| Protein sequence | MLYLKGLKKS HKISRLLQIA IALTLMVGLV QLWQTSLLQG QLLLKSQTQK MARLLVQQTA
YSAAPALQLQ NDEQLQWLAS ALVEDPKVMS AAIFSDQGIR LAFAQSLTNE ALDPESEDMS
LLLSKYPPYV EPVIQDGKNL GYVEVRLDTK LFFNEIKEAH NLNMEQQQMM LLVAGLIGML
LSRALSFKRA DFDRRRTRAK LRKNPKKNKA IKVPEAAEEA KPSDSQDTQQ DAVIASGTEA
VQKPAEAKKA KESKAEQDLD TPLLEKSAVS KAQNEDSNQA IAESKAKKAK TSAETKAALA
PEPVSEKAAE KALDVKPELK PEIKPEKETK DESSSEPTPQ SQSQSQSKTD TREQATQASV
TEAPSSTPAP NKPKVKSVRR VKTTAAKSTA EKAPAQPSDL DTDSTG
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