| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1034 |
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| Symbol | |
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| ID | 4251107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1206582 |
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| End bp | 1207349 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638117607 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_733171 |
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| Protein GI | 113969378 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000105438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000499451 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTAG ATACTCATGC GCACCTCGAT TTCGTTGAGT TTGATAGTGA CCGCGAACAG
GTCGTGCAGC GTATGCGACA AGCGGGCATC GACAATCTGA TCATCCCGGG AGTTTCTCCC
GAGCATTGGC CAAAACAATT GGCGATTGCT GAACAATATC AGTGTTATTT TGCCTTAGGG
ATCCATCCTT GGTTTTGCCC CGAAGATGTT GATAAGGCCA TCACAGAATT AACATTTCAG
GTTTCTCAGT TACGAGAATG TCCCCGTTTT GTTGCTATTG GTGAATGTGG TTTAGACAAA
CTTTATGCTG ATAATTGGAG TCAGCAGTTA GCCTTTTTTG ACGCGCAACT CACCCTTGCC
CATGAGCTGA ACCTGCCCGT TATTGTCCAT GCCGTCAGAG CTCACCAAGA AGTGTTATCC
CATTTAAAAC GCCATAAACT CGCCAAAGGT GGCGTAATAC ACGCCTTTTC TGGCAGCCCC
GATATTGCGA CCGAATATAT CAAGCTGGGT TTTAAGTTAG GAATTGGCGG ATTAGTCATG
AATCCTAATG CGAAAAAACT GCTTAAAACC GTCAGCGAAT TGCCCCTAGA CAGCTTCCTA
CTTGAGACTG ATTCTCCTGC CATGACCCCG TTAAATGTTA TCGAAAAACG GAATCAACCC
GCTAATGCTG TACTTTTTAT AGACAAAATC GCAACTTTGC AAAAAAAATC TAGTGTTCTA
ATATCAGAAC ACTTGGTGTC AAATGCAATG CAACTGTTTG ACCTTTAG
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| Protein sequence | MMLDTHAHLD FVEFDSDREQ VVQRMRQAGI DNLIIPGVSP EHWPKQLAIA EQYQCYFALG
IHPWFCPEDV DKAITELTFQ VSQLRECPRF VAIGECGLDK LYADNWSQQL AFFDAQLTLA
HELNLPVIVH AVRAHQEVLS HLKRHKLAKG GVIHAFSGSP DIATEYIKLG FKLGIGGLVM
NPNAKKLLKT VSELPLDSFL LETDSPAMTP LNVIEKRNQP ANAVLFIDKI ATLQKKSSVL
ISEHLVSNAM QLFDL
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