| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1026 |
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| Symbol | infB |
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| ID | 4251099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1194604 |
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| End bp | 1197261 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117599 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_733163 |
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| Protein GI | 113969370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.748082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000041871 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGATA CTACCGTAGA GAAATTGGCC ACGGAAGTGG GTAAAAGTGT TGAACGTCTG
ATTGAGCAAT TCTCTCAGGC CGGAATTAAG AAAGGCCATA CAGATAACGT GTCTGAAGCT
GAGAAGCAGC AGTTACTGGA TTATCTCAAG AAACAACATG GTGGCGATAA TGCGCCGACC
AAAATGACGC TGCAACGTAA AACCGTATCG ACCCTGAGTG TGGCTGGTAA TGGTGGTCAA
TCTAAAGACG TTAAAGTAGA AGTGCGTAAA ACCCGCACTT TTGTAAAGCG TGATGCGAAT
GACGCGGTTC TGAAGGCTGA AGAAGAAGCG AAAGCCAAGG CAGAAGCCGA AGCTAAGGCT
AAAGCGGAAG CTGAAGCCAA GGCAAAAGCA GAAGCCGAAG TGAAAGCCAA GGCCGAAGCC
GAAGCGAAAG CTAAGGCTGA AGCTGAAGCA AAAGCTAAGG CAAAAGCAGC GGCTGAAGTC
AAAGTCATCA AAGAATTATC GCCAGAAGCT GAAGCGGCTC GTGTTGAAGC TGAGCGTTTA
AAAGCGGTTC AAGCGGAAGC GACAAAGCGT AAGCAAGACG AAGAAGCTGC GAAAGCGGCA
GAAAAAGCGC GTCTGTTAGC AGAAGAAAAC TCTAAGCGTT GGGCCGAGGA AGAGCGTCAA
CGTTTAGAAG CCGAACGTTA CAGTGATCAC CATATCACCA CCTCTAAAGT GGCTCGTGCC
GCTGAAGATT CATCAGATAT GGATGAAGAG AAACGTGGCC GCCGTGCGCG TAACAAAAAT
ACCGCCAAGT CCAAACGTGG TGGTAAAGAT GCTCGCGATG GTCGCGAAAA ACACATGCGT
AACCGCAGCA CCGCGCCAGA ATCAATGGCT CATGGCTTCA ATAAGCCAGT TGCAGCTGTT
AACCGTGATG TGCGTATCGG TGAAACTGTT ACTGTGGCAG AACTTGCTCA CTTAATGGCT
GTTAAAGCGA CTGAAATCAT CAAGCAAATG ATGAAGATGG GTTCAATGGT TACGATCAAC
CAAGTGTTAG ATCAGGAAAC CGCCCAATTA GTTGCTGAAG AAATGGGTCA TAAAGTCGTA
CTGATCCGTG AAAACGAATT AGAGCAACAA GTACTTTCTG AGCGTGATGA AGAAGGCGTT
GTGAAGCTTG AGCCTCGTGC TCCTGTTGTG ACCATCATGG GTCACGTTGA CCACGGTAAA
ACGTCGCTGC TTGACTATAT TCGCCGCGCG AAAGTGGCTG CGGGTGAGGC CGGTGGTATT
ACTCAGCATA TTGGTGCATA CCATGTTGAG ACCGATAACG GCATGATCAC CTTCTTAGAT
ACCCCAGGTC ACGCCGCGTT TACCGCAATG CGTGCCCGTG GTGCTAAGGC AACGGATATC
GTAGTACTGG TTGTTGCTGC CGATGACGGC GTAATGCCAC AAACCATCGA AGCGATTCAA
CATGCTAAAG CCGGTAACGT GCCATTGATT GTTGCTGTCA ACAAGATGGA CAAGCCAGAA
GCCGATATCG ACCGCGTTAA GAGCGAATTA GCTCAGCACG GCGTAATGTC TGAAGATTGG
GGCGGTGACA ACATGTTCGC CTTCGTATCT GCTAAGACGG GTGCTGGCGT TGACGACCTA
CTCGAAGGCA TTCTGCTGCA AGCGGAAGTT CTTGAGCTTA AAGCCGTTCG CGATGGTATG
GCTGCTGGTG TAGTTATCGA ATCGCAACTG GACAAAGGTC GCGGCCCTGT GGCAACGATT
CTGGTTCAAG AAGGTACACT GCGCCAAGGC GATATCGTTC TATGTGGTTT AGAGTACGGT
AAAATCCGTG CGATGAAAGA CGAGAACGGT CGTTCAATCA CTGAAGCGGG CCCATCAATC
CCTGTTGAGA TCTTAGGTCT GTCAGGTGTG CCATCTGCTG GTGATGAAGC TACTGTTGTT
CGCGACGAGC GTAAAGCCCG TGAAGTTGCT CTGTACCGTC AAGGCAAGTT CCGTGACGTG
AAATTAGCGC GTCAGCAGAA GTCTAAGCTG GAAAACATGT TCGCGAACAT GACCGAAGGC
GAAGTGAAGG AACTGAACAT CGTTCTGAAG GCAGACGTTC AAGGTTCACT CGAAGCGATT
ACCGACTCCT TAATGGGTCT GTCTACCGAC GAAGTGAAAG TGAACATCAT CGCTCGCGGT
GTGGGTGCAC TGACCGAAAC CGACGCGACT TTAGCTGCGG CTTCTAACGC GATTATGGTT
GGCTTTAACG TCCGTGCCGA TGCACAGGCG CGTAAGACTA TCGAAAGCGA AAGTGTTGAC
CTGCGTTACT ACAGTGTTAT CTATAATCTG ATTGATGAAG TGAAAGCGGC GATGACGGGT
ATGTTGTCAC CAGAATTCAA GCAACAGATT ATCGGTCTGG CTGAAGTACG TGACGTATTC
AAATCACCAA AACTGGGCGC AATCGCCGGT TGTATGGTGA CTGAAGGTAC CATCAAGCGC
AGCGCACCAA TCCGCGTACT GCGTGATAAC GTGGTGATCT TCGAAGGTGA ACTCGAATCG
CTACGTCGCT TTAAAGACGA CGTTAACGAA GTTCGCAACG GCATGGAATG TGGTATCGGT
GTTAAGAACT ACAACGATGT CCGCGTGGGT GACCAAATCG AAGTATTCGA AACCGTCGAA
GTGGCACGTA CACTGTAA
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| Protein sequence | MADTTVEKLA TEVGKSVERL IEQFSQAGIK KGHTDNVSEA EKQQLLDYLK KQHGGDNAPT
KMTLQRKTVS TLSVAGNGGQ SKDVKVEVRK TRTFVKRDAN DAVLKAEEEA KAKAEAEAKA
KAEAEAKAKA EAEVKAKAEA EAKAKAEAEA KAKAKAAAEV KVIKELSPEA EAARVEAERL
KAVQAEATKR KQDEEAAKAA EKARLLAEEN SKRWAEEERQ RLEAERYSDH HITTSKVARA
AEDSSDMDEE KRGRRARNKN TAKSKRGGKD ARDGREKHMR NRSTAPESMA HGFNKPVAAV
NRDVRIGETV TVAELAHLMA VKATEIIKQM MKMGSMVTIN QVLDQETAQL VAEEMGHKVV
LIRENELEQQ VLSERDEEGV VKLEPRAPVV TIMGHVDHGK TSLLDYIRRA KVAAGEAGGI
TQHIGAYHVE TDNGMITFLD TPGHAAFTAM RARGAKATDI VVLVVAADDG VMPQTIEAIQ
HAKAGNVPLI VAVNKMDKPE ADIDRVKSEL AQHGVMSEDW GGDNMFAFVS AKTGAGVDDL
LEGILLQAEV LELKAVRDGM AAGVVIESQL DKGRGPVATI LVQEGTLRQG DIVLCGLEYG
KIRAMKDENG RSITEAGPSI PVEILGLSGV PSAGDEATVV RDERKAREVA LYRQGKFRDV
KLARQQKSKL ENMFANMTEG EVKELNIVLK ADVQGSLEAI TDSLMGLSTD EVKVNIIARG
VGALTETDAT LAAASNAIMV GFNVRADAQA RKTIESESVD LRYYSVIYNL IDEVKAAMTG
MLSPEFKQQI IGLAEVRDVF KSPKLGAIAG CMVTEGTIKR SAPIRVLRDN VVIFEGELES
LRRFKDDVNE VRNGMECGIG VKNYNDVRVG DQIEVFETVE VARTL
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