| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1019 |
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| Symbol | |
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| ID | 4251092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1186480 |
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| End bp | 1188453 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117590 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_733156 |
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| Protein GI | 113969363 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000780208 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000608132 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC
GTTGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG
GATTATTCTA CGTTCCTAGA CAATGTTCGT GATGGACAAG TCGCCAGTGT TGAAGTGAAA
AGTGACCAAC GTACTATCGA AGGTGCTAAG CGCACGGGCG AAAAATTCAC GACCATCATG
CCACTGTATG ACCAAGATTT AATTAATGAT CTTGACCGTA AAGGCATCAC CATGAAAGGC
CAAGAAGCCG AAGAGTCGGG TTTCTTAACC CAGATCTTTA TTTCTTGGTT CCCGATGTTG
TTGCTGATTG GGGTATGGAT TTTCTTTATG CGCCAGATGC AGGGCGGCGG TGGCAAAGGC
GCTATGTCCT TTGGCAAGAG CAAAGCCAAG CTGATGAGCG AAGATCAAAT CAAGACCACT
TTTGCTGACG TTGCTGGCTG TGATGAAGCC AAAGAAGAAG TGAAAGAGCT GGTCGATTAT
CTGCGTGATC CAACCAAATT CCAAAAACTG GGTGGCCGTA TTCCAACGGG CGTGCTCATG
GTTGGCCCAC CAGGTACAGG TAAAACCTTA CTGGCTAAAG CGATTGCGGG CGAGTCAAAG
GTACCTTTCT TTACCATTTC GGGTTCTGAC TTCGTCGAAA TGTTCGTCGG GGTCGGCGCA
TCTCGCGTGC GTGACATGTT CGAACAAGCG AAAAAATCAG CCCCTTGTAT TATCTTCATC
GACGAAATCG ATGCCGTAGG TCGCCAACGT GGCGCAGGCT TAGGTGGTGG TCACGATGAG
CGTGAGCAAA CCCTTAACCA AATGCTGGTT GAGATGGACG GCTTCGAAGG TAACGAAGGG
ATTATCGTGA TTGCGGCGAC TAACCGCCCA GACGTATTAG ACTCTGCGCT GCTGCGTCCA
GGTCGTTTCG ACCGTCAAGT GGTTGTAGGT CTGCCGGACG TTCGCGGTCG TGAGCAAATC
CTTAAAGTGC ATATGCGTAA AGTGCCGCTT TCTGAAGATG TGAAAGCAAG CGTAATTGCT
CGTGGTACGC CAGGTTTCTC CGGTGCCGAT TTAGCCAACT TAGTCAACGA AGCTGCACTG
TTTGCGGCGC GCGGTAATCG CCGTGTTGTC GGTATGGAAG AATTCGAGCG TGCAAAAGAC
AAGATCATGA TGGGTGCAGA GCGCCGCTCT ATGGTGATGT CAGAAGCCGA GAAAGAAATG
ACGGCATACC ACGAAGCGGG ACACGCGATT GTGGGCTGTT TAGTGCCAGA GCATGACCCT
GTGCACAAGG TAACCATTAT CCCGCGAGGT CGTGCGCTGG GTGTGACCTT CTTCTTGCCT
GAGGCCGATG CGATTAGCCA AAGCCGTCGT AAGTTAGAAA GCCAGATTTC GGTTGCCTAC
GGTGGTCGTT TAGCCGAAGA GCTGATTTAC GGCAGCGAAA AAGTGTCTAC AGGTGCTTCG
CAAGATATTA AATACGCGAC ATCGATTGCC CGTAACATGG TGACCCAATG GGGCTTCTCC
GACAAACTCG GTCCATTACT CTATGCCGAG GAAGAAGGTG AAGTGTTCTT AGGCCGTAGC
ATGGGTAAAG CCAAGGCGAT GTCCGATGAA ACCGCGACGC TTATCGATGC CGAGGTGAAG
GCCTTTATCG ATAAAAACTA CGGTCGTGCC AAGCAAATTC TGCTGGATAA CATCGATATT
CTGCATTCGA TGAAAGACGC GCTGATGAAG TACGAAACCA TTGATTCACT GCAAATTGAC
GATTTGATGA ATCGCCGTGA AGTGCGTCAG CCTGCCGATT GGCAAGCGGA TGATAATGGT
TCAAACGACA AAGGCAGTGA CAAAGGCGAG CCTGCGGTTA AAGTCGACGA AGTGGTAAAG
ACCGCTCCCG TTGAGGCAGA GCTGAAAGAT GCCGATGAGT CACCCGTTAA GTAG
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| Protein sequence | MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVASVEVK
SDQRTIEGAK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML
LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY
LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA
SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG
IIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA
RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM
TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADAISQSRR KLESQISVAY
GGRLAEELIY GSEKVSTGAS QDIKYATSIA RNMVTQWGFS DKLGPLLYAE EEGEVFLGRS
MGKAKAMSDE TATLIDAEVK AFIDKNYGRA KQILLDNIDI LHSMKDALMK YETIDSLQID
DLMNRREVRQ PADWQADDNG SNDKGSDKGE PAVKVDEVVK TAPVEAELKD ADESPVK
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