Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1010 |
Symbol | |
ID | 4251048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1178775 |
End bp | 1179308 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117581 |
Product | hypothetical protein |
Protein accession | YP_733147 |
Protein GI | 113969354 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0372015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0671955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC TGCTGTTAAT GCTGTTTTTT GCCGTAACCG GGATCACCTT AAACCATCCC AATTGGTTTT CATCAGCAGA TCAAGAACCG CGACGTGAAC AGTTTGATAT TCCTAACTAC TTGATACCAG CAGCGCCGCA GGAGCCAGAA TGGCGTTTAG CGGCGGGGCA TTGGTTAAAA AGCCAGTGGG ATATGGATAT TGGCACTGCC GATATCGATG AGGATGAGAT AAGCCTTGTG AATAAAGGCC CCGGCACGTA TCGCACCGTC ACCTTAGATC TGCTCGACGG CAAAGCCTAT GTTGAGACCT TAGATTATGG CGTTGTTGCA GTGCTTAACG ATCTGCACAA GGGGCGCAAT ACCGGGATAG TCTGGGCTTG GGTGTTAGAT CTCTGCGCCT TGCTGATTAT TCTCTTTTCG CTCACCGGCG CTTATTTGCT GCTGCCTCAA ACGAAACGAC TTAAAAAATC CTTGTTTTAT ATGGTGATCG TCAGCTCAGG CTGTGCACTT GTGTATGTCT ACTTTGTTCC ATAG
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Protein sequence | MALLLLMLFF AVTGITLNHP NWFSSADQEP RREQFDIPNY LIPAAPQEPE WRLAAGHWLK SQWDMDIGTA DIDEDEISLV NKGPGTYRTV TLDLLDGKAY VETLDYGVVA VLNDLHKGRN TGIVWAWVLD LCALLIILFS LTGAYLLLPQ TKRLKKSLFY MVIVSSGCAL VYVYFVP
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