| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1007 |
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| Symbol | |
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| ID | 4251045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1174571 |
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| End bp | 1175158 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117571 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_733144 |
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| Protein GI | 113969351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000149931 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.240982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA TTAAATTAAT CGTAGGTCTT GCCAATCCGG GCGCCGAATA TGCGCAGACT
CGCCATAATG CGGGTGCTTG GTATGTGGAA GAATTGGCCC GCATCTGTGG CGTCAGCTTA
GTGCCGGATA GCAAGTATTT TGGCCTCACC GCCAGAGCCG TATTGCATGG CAAAGATGTG
CGTTTGCTGA TCCCAACGAC TTATATGAAC TTAAGCGGCA AAGCCGTGGG GGCCTTAGCG
AATTTCTTCC GAATTACGCC TGAAGAAATT CTAGTGGCCC ACGATGAGTT GGATATGCCG
CCCGGTGTGG CTAAATTTAA ACTCGGTGGC GGTCATGGTG GCCATAACGG TTTAAAAGAC
ATTATTGCTA AACTGGCTAA TGATAAAAAC TTCTATCGTT TACGGATTGG GATTGGCCAT
CCCGGCGATA AGAATAAAGT CAGTGGTTAC GTACTGGGTA AGGCGCCAGC CAAAGAACAA
GAGCTGATCA ACGCCGCCGT AGATGAAGCC GTACGTTCCA CTGAAGTGCT ATTTAAAGAG
GACATGGTGA AAGCCATGAC TCGCTTACAC TCCTTTAAAG CGGAGTAA
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| Protein sequence | MSEIKLIVGL ANPGAEYAQT RHNAGAWYVE ELARICGVSL VPDSKYFGLT ARAVLHGKDV
RLLIPTTYMN LSGKAVGALA NFFRITPEEI LVAHDELDMP PGVAKFKLGG GHGGHNGLKD
IIAKLANDKN FYRLRIGIGH PGDKNKVSGY VLGKAPAKEQ ELINAAVDEA VRSTEVLFKE
DMVKAMTRLH SFKAE
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