| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1006 |
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| Symbol | |
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| ID | 4251044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1173177 |
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| End bp | 1174403 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117570 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_733143 |
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| Protein GI | 113969350 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0152891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.26628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CGATAAGCCA AACACTGCAG CCTGAACAGA CAACCTCAGA CACTCGCGTA
TTTGATGTGA TTTTAGTTGG TGGCGGCATG GTGGGGGCGG CGACGGCCAT AGGGCTGGCA
AAGCAAGGAT TACAGGTGGC CGTGATTGAA TCATTTGCCC CCGAGGCTTA TTCCCCTGAG
CAGGCATTAG ATGTGCGTGT GTCGGCGATA AGCGTGGCCT CTGAACAGTT GCTCGGGCAG
TTAGGCGCGC TCGAGAGCCT GCTTAACATG CGTAATGTGC CTTATCTGGG CTTAGAAACC
TGGGAGCTTG ATGGCTGCAT TACTCAATTC CATAGCTCAC AAATCGGCGC AAGCCATTTA
GGGCATATTG TTGAAAACCG TTTGGTGCAA CTTGCCCTGT GGGAGCAAAT GCAGCAATGG
GATGCGATTA AATTGTTTTG CCCCGAACGT GTGGCGACAT TTTCGCGCCT CACAGACGGG
GTGAGTGTGC ACTTACAATC CGGTATTCAA CTTGAGGCAA AGCTGCTCAT CGGAGCTGAT
GGCGCCAACT CGCAGGTGCG CCAATGGGCG GGGATTGGCA TCTCTGGGTG GGACTATGCC
CAATCGGCGA TGCTGATTAA TATCCAAACC GCCCAAGGTC AGCAAGATGT CACTTGGCAA
CAATTTACCC CTAACGGCCC GCGCTCGTTA TTACCTCTCC CCGGCAATCA TGCGTCGTTA
GTCTGGTATG ACGATGCCAA TCGCATTAAA CAGTTAATGC AGCTGAATCA TAAGCAGCTT
GCCGACCAAA TTCGCCAACA TTTTCCCGCT CGCTTAGACA GCGACTTTAC CGTTGAAGCC
AAAGGCAGTT TTGCCCTCAC GCGCCGCCAC GCGAATGCCT ATTTTAAGTC GAATGTGGTG
ATTTTAGGGG ATGCGGCGCA CACAATTAAC CCGTTGGCTG GCCAAGGGGT TAACCTCGGC
TTTAAAGATG TCGAGGCCTT ACTAACGGTA ATCAAGGCTG CATTAACCGA GGATAAACCT
TGGTGGTCCA CCGAGGTATT AAACGCCTAT CAAGCCAAGC GTTATCGCGA TAATCAGCTG
ATGATGACGA CCATGGATGT GTTTTACGCA GGCTTTAGTA ACGACATTCT GCCACTTAAA
TTACTGCGTA ATGGCGCGTT AAAACTGGCC AATATTAACT CCCCCATCAA GCGAACCGTG
CTGAAGTATG CGATGGGCCT CAATTAG
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| Protein sequence | MSQAISQTLQ PEQTTSDTRV FDVILVGGGM VGAATAIGLA KQGLQVAVIE SFAPEAYSPE
QALDVRVSAI SVASEQLLGQ LGALESLLNM RNVPYLGLET WELDGCITQF HSSQIGASHL
GHIVENRLVQ LALWEQMQQW DAIKLFCPER VATFSRLTDG VSVHLQSGIQ LEAKLLIGAD
GANSQVRQWA GIGISGWDYA QSAMLINIQT AQGQQDVTWQ QFTPNGPRSL LPLPGNHASL
VWYDDANRIK QLMQLNHKQL ADQIRQHFPA RLDSDFTVEA KGSFALTRRH ANAYFKSNVV
ILGDAAHTIN PLAGQGVNLG FKDVEALLTV IKAALTEDKP WWSTEVLNAY QAKRYRDNQL
MMTTMDVFYA GFSNDILPLK LLRNGALKLA NINSPIKRTV LKYAMGLN
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