| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1004 |
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| Symbol | |
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| ID | 4251042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1170935 |
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| End bp | 1172359 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117568 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_733141 |
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| Protein GI | 113969348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0127887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.185455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA AACTCCATAT TAAAACTTGG GGCTGTCAAA TGAATGAGTA CGACTCATCC
AAGATGGCGG ATCTTTTAGG CGAATACCAA GGTTACACCT TAACTGAAGA AGCGGAAGAA
GCAGATATTC TACTGCTAAA CACTTGTTCT ATCCGCGAAA AAGCACAGGA AAAAGTGTTC
CATCAGTTAG GTCGTTGGAA GACCCTCAAA GATAAAAATC CCGATCTGAT TATTGGGGTT
GGTGGTTGTG TTGCATCGCA GGAAGGTAAA GCGATCAAAG ACCGCGCTCA TTGCGTTGAC
ATTATCTTTG GACCACAGAC ACTGCACCGT CTGCCAGATA TGATCGAGCA AGTGCGTCGT
GGCGAAAAGG CCGTGATCGA CGTGAGCTTC CCTGAAATCG AAAAGTTTGA CCGTCTACCA
GAACCGCGCG CCGAAGGCCC AACGGCGTTT GTGTCTATCA TGGAAGGTTG CAGCAAGTAC
TGTTCATTCT GCGTGGTGCC TTATACCCGT GGTGAAGAAG TCAGCCGTCC ATCGGACGAC
ATCATCCTCG AGATTGCCCA ACTGGCAGAA CAAGGTGTGC GCGAAGTCAA CCTGCTCGGT
CAAAACGTTA ACGCCTACCG TGGTGCAACC CACGACGGCG GCATTTGTAC CTTTGCCGAG
CTATTACGCT ATGTTGCCGC TATCGATGGT ATCGACCGTA TTCGCTTCAC CACCAGTCAC
CCGATTGAAT TTACGCAGGA TATTATCGAC GTTTACGAAG ATACTCCTGA ATTAGTCAGC
TTCCTGCACT TACCAGTGCA ATCGGGTTCT GACCGCATTC TGACGGCAAT GAAGCGTGGT
CATATGGCGA TTGAGTACAA GTCAATCATC CGCCGTCTGC GCAAGGCCCG TCCTGATATC
CAAATCAGCT CTGACTTTAT CATTGGCTTC CCAGGCGAAA CCAAAGAAGA CTTCGCCGAT
ACCATGAAGC TGATTGAAGA TGTGGCGTTT GACCACAGCT TTAGCTTTAT TTACAGTGCG
CGCCCAGGTA CACCTGCGGC AGATTTACCC GATGACGTTG ATATGGAAGA GAAAAAGCAG
CGTCTGGCGA TTCTGCAGGA CCGTATCACT CAACAAGCCA TGCGTTACAG CCGCCATATG
ATGGGCACAG TACAACGTAT TCTGGTTGAA GGCCCATCGG TGAAAAACCC TATGGAGCTG
CGCGGCCGTA CCGAAAACAA CCGTGTCGTC AACTTCGAAG GTCTACCGAA GCACATTGGT
AGCTTTGTGG ATGTCGAAAT TGTCGACGTT TACACTAACT CACTACGCGG TAAATTTATC
CGTGGTGAAG ATGAGATGGA TCTGCGCCGC AACCTGCGCC CATCGGATAT TCTGGCCAAA
CACAAACAGG ATGACGATCT CGGTGTGACA CAATTTAAAC CTTAA
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| Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLGEYQ GYTLTEEAEE ADILLLNTCS IREKAQEKVF
HQLGRWKTLK DKNPDLIIGV GGCVASQEGK AIKDRAHCVD IIFGPQTLHR LPDMIEQVRR
GEKAVIDVSF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPSDD
IILEIAQLAE QGVREVNLLG QNVNAYRGAT HDGGICTFAE LLRYVAAIDG IDRIRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTAMKRG HMAIEYKSII RRLRKARPDI
QISSDFIIGF PGETKEDFAD TMKLIEDVAF DHSFSFIYSA RPGTPAADLP DDVDMEEKKQ
RLAILQDRIT QQAMRYSRHM MGTVQRILVE GPSVKNPMEL RGRTENNRVV NFEGLPKHIG
SFVDVEIVDV YTNSLRGKFI RGEDEMDLRR NLRPSDILAK HKQDDDLGVT QFKP
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