| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1002 |
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| Symbol | |
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| ID | 4251040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1169156 |
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| End bp | 1169617 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117566 |
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| Product | putative metalloprotease |
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| Protein accession | YP_733139 |
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| Protein GI | 113969346 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00904432 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0928989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTTG ATTTAGCCTT AGATGTGCAA TACGCCACGG CGAGTGACTA TCTGCCGAGT
GAAGAGCAGT TTGCCCTCTG GGTAAAAACC GCCATTGGTA ACAGCATGGA ACAGGCGGAG
CTGACCATTC GCATCGTCGA TTCCCGTGAA AGCCAAATGC TAAACAGCAC GTACAGAGGA
AAAGACAAAC CGACCAATGT GCTATCGTTT CCCTTTGAAG CACCGCCAGA AATTGAACTT
CCACTGCTTG GAGATCTTGT CATTTGTGCC ACAGTCGTTG AAAATGAAGC GCGTGAACAA
GATAAAACCC TAGAAGCCCA TTGGGCACAC ATGGTTGTAC ATGGTTGCCT GCATCTGCTA
GGTTATGATC ACATTGAAGA CGAAGAAGCC GAAGAGATGG AGTCGTTAGA GACTCAACTC
ATTGAAAGCT TAGGTTTTAC TGACCCATAT AAGGAACAAT AA
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| Protein sequence | MSLDLALDVQ YATASDYLPS EEQFALWVKT AIGNSMEQAE LTIRIVDSRE SQMLNSTYRG
KDKPTNVLSF PFEAPPEIEL PLLGDLVICA TVVENEAREQ DKTLEAHWAH MVVHGCLHLL
GYDHIEDEEA EEMESLETQL IESLGFTDPY KEQ
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