Gene Shewmr4_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0994 
Symbol 
ID4251032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1160586 
End bp1161224 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID638117558 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_733131 
Protein GI113969338 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000321075 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.102942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GTATTTTAGG CGGCACCTTC GACCCCATAC ATTACGGCCA TATTCGCCCC 
GCGATGGAAG TCAAAGCCAG TCTCAAGCTG GATAACATCC TGCTGATGCC CAACCATATT
CCGCCGCATA AAAACACCAC CCACTCGAGC ACGGCGCAGC GGCTCGAAAT GGTCGCGCAG
GTATGTGAGG CATTAACAGG TTTCGAGCTT TGTGATATCG AAGCTAAACG CAACAGCCCA
TCCTATACGG TTGTCACCCT AAAGCAATTA AGTCGGCTTT ATCCCGATGA CGAACTGTTT
TTTATCATGG GGATGGATTC GTTTATTCAC CTGCAAAGCT GGCACAAATG GCAGCAACTG
TTTGAATTAG CCAATATTGT GGTATGTCAG CGCCCGGGCT GGCATTTAGC CGAAGGGCAC
CCAATGCAGC ATGAGCTCAG CGCACGTCAC GCAACGCTTG AAGCCTTAAG TCACTCAAGC
GCGCCGCAAC ATGGGCGCAT CTTTACCGTC GACATCAGCC CACAGGATAT TTCGTCCACC
CAAATTCGCT CACAGCTGGC CATGGGGGAA ATTCCACAGG ACGCCCTCCT ACCCGTCACT
CTAAATTACA TTCAAAAACA ACGGCTTTAT TTTTCCTAG
 
Protein sequence
MRIGILGGTF DPIHYGHIRP AMEVKASLKL DNILLMPNHI PPHKNTTHSS TAQRLEMVAQ 
VCEALTGFEL CDIEAKRNSP SYTVVTLKQL SRLYPDDELF FIMGMDSFIH LQSWHKWQQL
FELANIVVCQ RPGWHLAEGH PMQHELSARH ATLEALSHSS APQHGRIFTV DISPQDISST
QIRSQLAMGE IPQDALLPVT LNYIQKQRLY FS