Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0977 |
Symbol | |
ID | 4251628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1144085 |
End bp | 1145053 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117540 |
Product | hypothetical protein |
Protein accession | YP_733114 |
Protein GI | 113969321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0681131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGACG CGATTTGTGT ACTCACAACC GAGGCAGCGG CAGAGCACGC TTCGTCGCCA TTACGACTCA ATCCTCATGC TCAGGCTGGT GTCACCTACA GTGTGTTCAA GTTTCAGCAG TTACCCGAGG CTGAGATTGA GCGTTTGCGC CAGCATTTAT ATTGCCCCGC CTGCTACGGC AAAGCCTATT TTCGTAAAGC ATCTAAGGAT GGTAGGGCCG CCTGTTTTGG CTCCCGTTAT CATGAGCTCG ATTGCATCGA ATTTAATCCG TCGGCGCAAA AGTCCCGTGA AGAACAAGAT GCCCTCGAAG TGCAGCAACA ACTGCTCGAC GCCGATGCCT TGGTTATCGA TTTTTCGGTT AATCCCAGTA ATAAGAGACC CTCTAACTCA GCGCACAAAA TCAGGGCTTC CCAAGAGCAA GAGGTTGGAG CCAAAAGTGA ACTTGAAAAT GATACCGAGC CATTAGCGTC AGTACAGGAG CCCAAAGCTG ACTATCAAGT GGCGGCCGAT AAGCCCGAGA TAGCCATCAC GGCAAAGTGT ACTCCGAGCC AAGGGCTAGA AAAGTTACTC CATAGCCTGC TGCGCGGCTC GGATTTGGCG GCTTCGGATC TTTGGGTTTA CACCGATGAT GAGCGAAAGT ACCGCTGGCG GGCGAAGAAT TTGTTTGTGA ATTTTGCCGA TGCGGATCCG ACGGATAACA AACCCCATAT GTACTGGGGT ACTATCTCTC ATAGCGACCC GACGTTATCT TGGCTCAATC CCGCCGACAG TAAAGACATA GGTATTCCTA TTGAGGCCGT CAAAACTAAA TTGTTTAAGC GCTTTAATAT CGAAGATAAA CGGGATTTAG AGGGCGCTGG GCTTATCCTG TTTGGTAAGT GTTTTTGGAA TAAGGATAAG ACCCGCAAGA TTATCCAGCT TTGGGACAAT GATTTGCGGC GGATTTTTAT CTCAACCCTT GATGATTAA
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Protein sequence | MLDAICVLTT EAAAEHASSP LRLNPHAQAG VTYSVFKFQQ LPEAEIERLR QHLYCPACYG KAYFRKASKD GRAACFGSRY HELDCIEFNP SAQKSREEQD ALEVQQQLLD ADALVIDFSV NPSNKRPSNS AHKIRASQEQ EVGAKSELEN DTEPLASVQE PKADYQVAAD KPEIAITAKC TPSQGLEKLL HSLLRGSDLA ASDLWVYTDD ERKYRWRAKN LFVNFADADP TDNKPHMYWG TISHSDPTLS WLNPADSKDI GIPIEAVKTK LFKRFNIEDK RDLEGAGLIL FGKCFWNKDK TRKIIQLWDN DLRRIFISTL DD
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