| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0964 |
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| Symbol | |
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| ID | 4251615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1127828 |
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| End bp | 1128640 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117527 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_733101 |
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| Protein GI | 113969308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000624592 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGAC AAGTGAGAGT TGCAATTGTC GGTGCGGGTG GACGCATGGG ACGGACTCTT
ATTGAATCGG CTTATCATCA AGAGCACATT CGCTTAGGTG CCGCTATCGA GCGTCCTGGT
TCAAGCTTAG TTGGCGTGGA TGCGGGCGAG CTTGCCGGTG TCGGCAAGTT AAATGTCCTA
GTGATGGATT CGCTCGACTA TGCGACCGAT GACTTTGATG TGCTGATTGA TTTTACTGCG
CCAGAGGCCA GTATTGTCCA TTTAGACTGG TGTGTGCGCC ATAAGAAAGC CATGGTGATT
GGCACAACTG GTTTCAATCA TGCTCAAAAA GAACAGATCA ATGCCTTTGC TGAGCAAACG
CCGGTAGTGA TGGCGCCGAA TATGTCTGTG GGTGTCAATC TGATGTGGAA ATTGCTCGAA
CTGGCCGCTG AGGTCATGGG CGATTACACC GATATCGAAA TTATCGAAGG TCACCACAGA
CATAAAAAAG ACGCGCCATC TGGCACTGCG CTAAAAATGG GTGAAGTCAT CGCTAAGACC
TTAGGTCGCG ATCTCGAAAA ATGCGCCGTC TATGGACGCG AAGGGATCAC TGGCGAGCGT
GACCGTGAAA CGATTGGTTT TGCGACTGTG CGCGCGGGCG ACTTAGTCGG TGAGCATACC
GCCATGTTTG CCGATATCGG TGAGCGTTTG GAGATCACCC ATAAAGCCTC TAGTCGTATG
ACCTTTGCTA ACGGCGCTAT GCGTGCCGCC CATTGGTTAG TGGAGCAAAA ACCGGGTCTG
TATGACATGC AGCAGGTATT AGGTTTGAAT TAA
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| Protein sequence | MGGQVRVAIV GAGGRMGRTL IESAYHQEHI RLGAAIERPG SSLVGVDAGE LAGVGKLNVL
VMDSLDYATD DFDVLIDFTA PEASIVHLDW CVRHKKAMVI GTTGFNHAQK EQINAFAEQT
PVVMAPNMSV GVNLMWKLLE LAAEVMGDYT DIEIIEGHHR HKKDAPSGTA LKMGEVIAKT
LGRDLEKCAV YGREGITGER DRETIGFATV RAGDLVGEHT AMFADIGERL EITHKASSRM
TFANGAMRAA HWLVEQKPGL YDMQQVLGLN
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