Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0962 |
Symbol | |
ID | 4251613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1126136 |
End bp | 1126945 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638117525 |
Product | peptidase M48, Ste24p |
Protein accession | YP_733099 |
Protein GI | 113969306 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00197465 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA CATCACTCGC CTTAGTGGCG ATTGGACTTA CGTTAGGATT ATCGGGCTGC GCGACCACTA AATCGCCCAC GGGGCGTGGC CAAACCTTGC TGTATTCGGC TTCGCAGATG CAGCAAATGG GAGATGCTTC TTTTGAAGAA ATGAAAAAGC AGCAAAAGAT CAGCAGTGAT AAAAAGCTCA CCCAGTACGT AAATTGCGTG GCGAATCGCG TCACCGCTGT GCTGCCCGAT CAAAGCCAGA AGTGGGATGT CGTCTTGTTC AACTCCGAGC AAGTGAACGC CTTTGCATTG CCCGGCGGGC ACATTGGCGT GTATACGGGC TTATTAAAAG TCGCGAGCAC TCCAGACCAA CTGGCGACCG TATTAGGCCA TGAAGTGGCC CACGTCTTAG CCCAGCACGG TAATGAGCAG GTCTCACGGG CGCAGATGAC GGGCATGGGG ATGCAAATCG CCGATGCCGC CCTTGGCGCG AGCGGCGTCT CAAACCGTGA CTTATATATG TCGGCCTTAG GACTGGGAGC GCAGGTTGGG GTGATTTTAC CCTTTGGCCG CGCTCAGGAG AGTGAGGCGG ATGTGATGGG GCTGGAGTTG ATGGCACGGG CAGGGTTTGA CCCCGCCCAG AGCGTGGTGC TTTGGCACAA TATGTCGAAA GCGGGCGGTA GCCAAGGGCC AGAGCTGTTA TCGACGCACC CATCAAACAG CAACCGCATC GCCCAACTCG AGCAATTACA GGGGCAAATG CAGCCTTTGT ATCAGAGCGC AAAGGCGAGT ATCAAAAACC AATGCGTGTT GCCTAAATAG
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Protein sequence | MKATSLALVA IGLTLGLSGC ATTKSPTGRG QTLLYSASQM QQMGDASFEE MKKQQKISSD KKLTQYVNCV ANRVTAVLPD QSQKWDVVLF NSEQVNAFAL PGGHIGVYTG LLKVASTPDQ LATVLGHEVA HVLAQHGNEQ VSRAQMTGMG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADVMGLEL MARAGFDPAQ SVVLWHNMSK AGGSQGPELL STHPSNSNRI AQLEQLQGQM QPLYQSAKAS IKNQCVLPK
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