Gene Shewmr4_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0961 
Symbol 
ID4251612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1125402 
End bp1125995 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID638117524 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_733098 
Protein GI113969305 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0164195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGA CATTGGCGAT AGGTAACGCA CTTCACCACA TGGTAACTCA CGGGTTAACC 
ACCCAACGTT TTACGCTTCG ACCATTTCAG CGAGCTGATC TCGAAGCTTT TACCGCCTAT
CGAGCCGAGC CTAAGGTCGC CAAATATCAA AGCTGGACGG ATTACTCTTA TAGCGATGCT
GTCGCGTTAT TCGAGAACAT GGATTACGCA CAATTTGGCG AGGCGGACAC TTGGTTTCAA
TTGGCGATTG TCACTGCGGC ATCGGCAGCG ACGCCTGCCA TCTTAGTGGG CGATGTGGCG
CTGCATTTTA TCGATGAACA GCAAATGGAA ATCGGCTTTA CGATTGCGTC TGAGTATCAA
GGCCAGCAGG TTGCGTTTGA GGCCGTCAGC GCATTGCTGG GTTATCTCTT TGTGGAATTA
GATAAGCATC GTGTCATTGC GATAACCGAT GTAGAAAATC TTGCCTGCTG TAGATTACTC
GAAAAGCTCG GCTTTCGGCG CGAAGCCCAT TATGTGAAAA ACACCTTCTT TAAGGGCGCA
TGGGGCGATG AATACCTCTA TGCCATGTTA AGGGAAGAAT ATATTGCACC TTAA
 
Protein sequence
MASTLAIGNA LHHMVTHGLT TQRFTLRPFQ RADLEAFTAY RAEPKVAKYQ SWTDYSYSDA 
VALFENMDYA QFGEADTWFQ LAIVTAASAA TPAILVGDVA LHFIDEQQME IGFTIASEYQ
GQQVAFEAVS ALLGYLFVEL DKHRVIAITD VENLACCRLL EKLGFRREAH YVKNTFFKGA
WGDEYLYAML REEYIAP