| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0941 |
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| Symbol | |
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| ID | 4251872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1098620 |
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| End bp | 1099876 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117504 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_733078 |
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| Protein GI | 113969285 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC TTGGTATTTT TAAATCTACT CCGCTCGAGG TTTACCTCGG TGTGAGTATG
TTTACTGCTA TCGTCCTCGT CTTAGTGTTA GTGATTTTAT TCGCTAAATC TAAGCTAGTG
TCTAGCGGTG ACATCACGAT CGGCATCAAC GACGATCCTG AAAAAGCGAT TACAACCGGT
GCTGGTGGCA AGCTGTTAGG CGTGCTGGCG AACAGCGGTA TCTTCGTATC GAGCGCCTGT
GGTGGCGGTG GTTCTTGTGG CCAATGTCGC GTAGTGGTTA AGTCTGGCGG CGGTGATATT
CTGCCAACAG AATTAGATCA CATCAGCAAG GGTGACGCCC GTAAAGGTTG CCGTCTGTCT
TGTCAGGTGA ACGTTAAGAA CGACATGGAA ATCGAACTTG ACGAAGAAAT CTTCGGTATT
AAGAAGTGGG AATGTACTGT TATCTCTAAC GATAATAAGG CAACCTTCAT TAAAGAACTG
AAGCTGCAAA TTCCTGATGG TGAATCTGTT CCGTTCCGTG CGGGTGGTTA CATCCAGATC
GAAGCGCCTG CACACCATGT TAAATATGCT GATTTCGACG TTCCTGAAAA GTACCGTGGT
GACTGGGAAC ACTTTGGCTT CTTCAAGTTA GAATCTAAAG TTGACGAAGA AACGATCCGT
GCTTACTCAA TGGCTAACTA CCCAGAAGAG TTTGGCATCA TCATGTTGAA CGTGCGTATC
GCAACGCCAC CTCCACGTAA CTTGAGCTTA CCATGCGGTA AGATGTCATC TTATATTTGG
AGTCTGAAGG CTGGCGATAA AGTCACGATT TCTGGCCCAT TCGGTGAATT CTTCGCGAAA
GATACCGATG CAGAAATGGT GTTTATCGGT GGTGGTGCGG GTATGGCACC AATGCGTTCA
CACATTTTCG ACCAACTGAA GCGTCTGAAG TCTAAGCGTA AGATGAGCTT CTGGTACGGT
GCACGTTCTA AGCGTGAAAT GTTCTACGTG GAAGACTTTG ACGGCCTAGC GGCTGAAAAC
GACAACTTCG TATGGCATGT GGCCCTGTCT GATCCTCAAC CTGAGGACAA CTGGGATGGT
TACACAGGTT TCATCCATAA CGTACTGTAT GAAAACTACC TGAAAGACCA TGAAGCGCCA
GAAGATTGTG AGTTCTACAT GTGTGGACCT CCAATGATGA ACGCAGCCGT AATCGGTATG
TTGAAAAATC TTGGTGTCGA AGACGAAAAC ATCCTGTTGG ATGACTTCGG CGGCTAA
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| Protein sequence | MDILGIFKST PLEVYLGVSM FTAIVLVLVL VILFAKSKLV SSGDITIGIN DDPEKAITTG
AGGKLLGVLA NSGIFVSSAC GGGGSCGQCR VVVKSGGGDI LPTELDHISK GDARKGCRLS
CQVNVKNDME IELDEEIFGI KKWECTVISN DNKATFIKEL KLQIPDGESV PFRAGGYIQI
EAPAHHVKYA DFDVPEKYRG DWEHFGFFKL ESKVDEETIR AYSMANYPEE FGIIMLNVRI
ATPPPRNLSL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS
HIFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN DNFVWHVALS DPQPEDNWDG
YTGFIHNVLY ENYLKDHEAP EDCEFYMCGP PMMNAAVIGM LKNLGVEDEN ILLDDFGG
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