| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0939 |
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| Symbol | |
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| ID | 4251870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1097326 |
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| End bp | 1097958 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638117502 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_733076 |
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| Protein GI | 113969283 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0695822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACG CTAAAGAACT GAAACAGGTT CTGACTGGAC CTATCGTCAA CAACAACCCG
ATTGCATTAC AAGTACTTGG TGTATGTAGT GCGTTAGCGG TAACGAGCAA GCTCGAAACT
GCACTGGTAA TGGCGTTGGC ATTAACTGCG GTAACAGCGT TTTCTAACCT GTTTATCTCA
ATGATCCGTA ACCATATTCC TAGCAGCGTA CGTATTATCG TACAGATGAC CATTATTGCC
TCTCTGGTAA TCGTGGTTGA CCAATTGCTG CAGGCTTATG CTTATCAGAT TTCTAAGCAG
TTATCGGTAT TCGTGGGCCT TATCATTACG AACTGTATCG TAATGGGTCG CGCTGAAGCC
TATGCGATGA AAACACCGCC AATGATGAGC TTTATGGATG GTATCGGTAA CGGTTTAGGT
TACGGTGCGA TTCTGTTAGC CGTTGGCTTC GTGCGTGAAC TGTTTGGTAA TGGTTCTCTG
TTCGGTGTTC AAATCCTGCA CAAGATCTCT GAAGGTGGCT GGTATCAACC TAACGGTCTG
TTATTACTGC CGCCAAGTGC GTTCTTCCTG ATCGGTATTC TGATTTGGAT TATTCGTACC
TATAAGCCAG AGCAAGTTGA AGCAAAAGGG TAA
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| Protein sequence | MSDAKELKQV LTGPIVNNNP IALQVLGVCS ALAVTSKLET ALVMALALTA VTAFSNLFIS
MIRNHIPSSV RIIVQMTIIA SLVIVVDQLL QAYAYQISKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGAILLAVGF VRELFGNGSL FGVQILHKIS EGGWYQPNGL
LLLPPSAFFL IGILIWIIRT YKPEQVEAKG
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