| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0922 |
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| Symbol | |
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| ID | 4251853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1075637 |
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| End bp | 1076485 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117485 |
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| Product | ApbE family protein, putative |
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| Protein accession | YP_733059 |
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| Protein GI | 113969266 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0767638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.984962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACGTA GAGCCAAACC CTTACTCGGC ACCTTAGTCG AAATTGCCGC TGAGTCCGTT
GTCGAGCACA ATGCTCATCC TTCACTGGAT GAGTCAGCCC TTCAAGCCGC TATAACAGCG
GCTTTTTCGC GTGTGGCCCA TATTGGTCGC TTACTCAGTT TTCACCAGCA GGATAGTGAG
CTTAATCTAC TGAATCGCCA GCCGGGGCAG TGGATATCCT TAAGTTCTGA TAGCCTGAGG
GTGTTGAAGC TTGCCAAGTG GTTTGGCCGG GCCAGTGACA ACCTTTTCAA CTGCACAGTG
GGTGGCGAGA TGATGTCCCG CGGCGCCTTA CCTGCTTATC TCGGGATGCC GCTGCTGTTG
CAGGGAGATT GGCGAGATAT TGAAATCCAA GCGGATAAAG CCAGATTGGC TCGCCCACTG
ATTTTGACCT TAGATGGCAT AGCTAAAGGT TATGCGGTCG ATATGGCGGT CACTGAATTG
CGACGGGCTG GCGTGTGCGG TGGCTGGGTG AATGCGGGTG GCGATTTAAA AGTGTTTGGT
AGCGCTTCAT TAAATGTGCT GTGCCGTGGT CCGAACGGAT TGAGTCAAAA GATCAACGTC
AGTAATACCG CCCTTGCCAG CTCGCGGGTT TCCCAGCATT TAAGCCATGA TTACCCCGCA
TTATTGTTAC CAACGGGCAA TTTAGACGAG CAACAGTGTG CCAGCGACCA AGAAAGGGTT
GTGAGTGTGC GCGCACCGTT TGCCTGGCGC GCCGATGCGT TAACCAAGGT AGCGGGTTAC
CTTGACGATG CCACTGCCGC CGCAAAAATT CAGCAGTTGG GTGGCGATTT AGTCAACTTC
GCACCCTAA
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| Protein sequence | MIRRAKPLLG TLVEIAAESV VEHNAHPSLD ESALQAAITA AFSRVAHIGR LLSFHQQDSE
LNLLNRQPGQ WISLSSDSLR VLKLAKWFGR ASDNLFNCTV GGEMMSRGAL PAYLGMPLLL
QGDWRDIEIQ ADKARLARPL ILTLDGIAKG YAVDMAVTEL RRAGVCGGWV NAGGDLKVFG
SASLNVLCRG PNGLSQKINV SNTALASSRV SQHLSHDYPA LLLPTGNLDE QQCASDQERV
VSVRAPFAWR ADALTKVAGY LDDATAAAKI QQLGGDLVNF AP
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