Gene Shewmr4_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0921 
Symbol 
ID4251852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1075086 
End bp1075637 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID638117484 
ProductFMN-binding domain-containing protein 
Protein accessionYP_733058 
Protein GI113969265 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00888668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATA CATATCTGAA TAGCTTGTGG TTTATGCCAA TGGTCGTCGT GGCCGCCCCT 
GCATTTTCTG CGGATTATTT AACCGTGGCC CAAGCGCAGG CGTTGATTTT TGATAAGGCA
GCGGTATTTA GTGAGCGTCC AACCTTACTG AGCTCCGATG CGAAAGATCA GATCAAAGAT
TTATCGGGCG TTCGCCAACG CCAAGATCAG CAACCTATCT GGAAAGTTGA AAAGGACGGT
CAGTTTCTCG GTTGGTTTGT GGTGGATGAT GTTGTCGGTA AACATGAGTA TATTACCTAC
GCTATCGGCA TTAGTCCGCA GGGCGAAGTG CTTGGGTTAG AGGTGCTCAG TTATCGTGAA
ACCCACGGCG GCCAAGTGCG TGAAGCGAGT TGGCGCGATC AGTTCCACGG TAAAACCCTC
AAAGATCCCT TTAAACTCGA TGAAGATGTC AGCAATATTA GCGGTGCCAC ATTAAGTTGC
CGTAATTTAC TCGATGGCGT AAAACGGTTA CTTGTTATCC ATCAACTCTT TTTGTCGCAG
TCAGTCGCAT AG
 
Protein sequence
MAHTYLNSLW FMPMVVVAAP AFSADYLTVA QAQALIFDKA AVFSERPTLL SSDAKDQIKD 
LSGVRQRQDQ QPIWKVEKDG QFLGWFVVDD VVGKHEYITY AIGISPQGEV LGLEVLSYRE
THGGQVREAS WRDQFHGKTL KDPFKLDEDV SNISGATLSC RNLLDGVKRL LVIHQLFLSQ
SVA