| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0919 |
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| Symbol | |
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| ID | 4251850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1072212 |
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| End bp | 1073549 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117482 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_733056 |
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| Protein GI | 113969263 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0324061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.890337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCAAT CAGCCCAAAC CACTGCACCG AGTAGCCCGG CATCTTTTAT TGCCCTGTTA
CCCTTATTCG TTTTTCTAAG TCTGTTTATT GGCGCAGGCG TCTATTTCCA AAGTCAAGGT
GTGGACTTTG CCTTCTATCA ATTACCGAGT GTGATTGCCA TTCTGCCAGC CATTATTCTG
GCCTTGGTAT TATCAAAACA AAAACTCAAT CAAGCGATTG ATACCTTTAT CGGCGGTATT
GGCCACAGCA ATATTATTGC TATGTGTTTG ATTTACTTGT TGGCTGGCGG TTTTGCTGCG
GTAGCGAAAG CCACAGGCGG TGTCGATGCG ACTGTCGCCT TAGGTTTATC ACTTATTCCT
TCAAACCTAT TACTGCCTGG CTTTTTTGTG ATTGCCGCCT TTATTGCCAC CGCAATGGGT
ACCTCAATGG GCACTATTGC CGCAGTGGCA CCTATCGCCT TAGGCGTTGC CGATCAGGCA
CAAATTGATT ATGCCTTGAT GGCGGGCGCT GTGATGTCTG GCGCACTGTT TGGCGATAAC
CTCTCGATTA TTTCGGATAC CACTATTGCT GCCACTCGTA CTCAAGGCTG TGATATGAAA
GATAAATTCC GTGAGAACCT GATTTTTGCT ATCCCGGCTT CACTACTGAC CTTTATCGCC
TTTGTGATTG CAGGCCAAGG CCAAGCCGAT CTAGCCGCTC AAGAAATTGA CTTTATTAAG
GTAATTCCTT ACCTGACGAT TCTGGTATTG GCGGTCGCAG GGTTAAACGT GTTTGTCGTC
TTGACCTTAG GCATTCTGCT GGCGGGCACG GCGGGATTCC TGACCATGGA CTATGGCGTT
ATCCAATTTG GTAAGGATAT CTACGCGGGC TTTAGCAATA TGCAGGAAAT CTTCATCCTG
TCGATGCTAG TCGGTGGTTT AGCCGCGCTG ATGCAGCAAC AAGGTGGTCT AGCCTTTGTA
AGCAAGCAGA TTGAAAAGCT CATCACCCGT TTCTCAAAAG CTCAAGGTGA AGCCTCATGC
CGCGCGGCCG AATTAGGCAT GGCAGGGATT GTGGCCGTCA CCAACAGCTG CGTTGCTAAC
AACACAGTGT CTATCGTTGT GACCGGTGAT ATTGCTAAAG ATCTGGCAGA AAAACACGGT
GTTAGCCCTA AGCGCGCGGC CAGTGTACTC GATATTTTTG CCTGTATTAT TCAAGGGTTA
ATTCCCTATG GCGCCCAAGC ACTGCTGATT GCTTCAACCT TTAGCATCAC ACCGCTGGCG
GCCGTCTCCC ACGCTTGGTA CTGCATGATC CTAGCAGCTG TCGCGATTGC GATTGTGATT
TTCCGTAAGC GCCACTAA
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| Protein sequence | MSQSAQTTAP SSPASFIALL PLFVFLSLFI GAGVYFQSQG VDFAFYQLPS VIAILPAIIL
ALVLSKQKLN QAIDTFIGGI GHSNIIAMCL IYLLAGGFAA VAKATGGVDA TVALGLSLIP
SNLLLPGFFV IAAFIATAMG TSMGTIAAVA PIALGVADQA QIDYALMAGA VMSGALFGDN
LSIISDTTIA ATRTQGCDMK DKFRENLIFA IPASLLTFIA FVIAGQGQAD LAAQEIDFIK
VIPYLTILVL AVAGLNVFVV LTLGILLAGT AGFLTMDYGV IQFGKDIYAG FSNMQEIFIL
SMLVGGLAAL MQQQGGLAFV SKQIEKLITR FSKAQGEASC RAAELGMAGI VAVTNSCVAN
NTVSIVVTGD IAKDLAEKHG VSPKRAASVL DIFACIIQGL IPYGAQALLI ASTFSITPLA
AVSHAWYCMI LAAVAIAIVI FRKRH
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