Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0908 |
Symbol | |
ID | 4251699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1058236 |
End bp | 1060533 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117471 |
Product | organic solvent tolerance protein |
Protein accession | YP_733045 |
Protein GI | 113969252 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000625202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.177324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCC GTTACTTTCT GGCCTTGAGC CTGTTACCGC AACTAGTCCT GGCAGACGAA TCTCCAACAG CCTCAGCGTC ACAATGTGTC ATCGAACCGC CAGTACCTCG TATCGTATCT CAACCCGGCC TAAGCGCCGC GGATCAAGAG AAAATTCGTA TTGTTTCGGA TCGCTCAAAC GCCGAAATGG GCAAACAAGC CATTTTTACC GGTGATGTGG TCTTCAGTCA GGGCGACAGA CACATTGCCG CCGATGAGGC GATTCTCGAT CAGGCGACCG AGCAGTTCGA TGCCAATGGC AACCTCGTCT TCCAAGACAA TATTTTTACC GTTACCGCCG ATTCGCTGCA GGCACAGATG CGCAGCAACC GCGCCACCCT AAAGGGTGCC CAGTATTGGC TCCATGGTCA GCAGGTTCAC GGCGATGCCG AAAAACTGCA AATCACCATG AATAACAACC TTATCTTGAC CAACACTAAC TTCACGACCT GCCCGCCGGA CAATGTCTCT TGGCTGCTCG AAGCGGAAAA AATTAAGATT AACAGTGAAG AAGAATGGGG CGAGATTTGG AATGCAAAGC TGAGAATTGC CGATATTCCG GTGTTCTACA TTCCTTATAT GACGGTGCCA GTTTCCGATA AACGTAAAAC CGGCTTCCTC TACCCTAGCT TTAGCACTAG TACCACCAAC GGTTTTGAAG TTTCCGCGCC CTATTATTGG AATATCGCGC CTGAGTATGA CCTCACCTTT ACACCTAACT ATATGTCTAG CCGTGGTTTA TTCACTAAGA CAGAGTTTCG CTATCTCGCG GGTGAGGCCC AAAGTGGCCG CTTGAATCTA GAGTATTTGG GCAACGATCA GATGCTCAGC GGTAGTCCAA ATCGTTACCT CTATAACTGG CAACACCAAG GCGCCATCGA TAAAAACTGG CGGGTACTTG CCAACTTTAC CGAAGTGTCT GACAACAACT ATTTCAACGA CTTAAAGTCT GATGTGAACC GCGCCACCGA TAACCAGTTA TCGCGGATTG GTGAAGTCAG CTACTTTGAG CGTAACTGGG ATATCAGCAC GCGGGTGCAA GACATTAAAG TACTGGGTGA GGACGAAAAG CCTTATCAAG TGATGCCGCA GGTGAATTTT AACTACCGCG CCGCCGACTT TTGGAACAAC TTGGACTTTG GCTTTAACTC TGAGTTGACC AACTTCGCCC ATGATGACAG CGATATGAAT ACCGCCACCC GTTTGCATAT GGCGCCTAGC CTGACGCTAC CTATTCATGG TCCTTCAGGT TCGCTGACTA GCCAAGTCAA ACTGATGCAA ACCAACTATT GGCAGGAACA AAATAACAGT GCCTTCGATG GTTTAGACGA TACAGTGAGC CGCACGATTC CACAGGTGCG GATCAATGGA CAGATCAACT TCGAGCGTTT TACCGAACTG TTCGATCAAA ACTACCGTCA GACACTCGAA CCTCAGTTCC AGTATTTGTA CGTGGGTTAT GAAGATCAAC GTGGCATCGG CATTTACGAT ACCGCCCAAT TGCAGGACGA CTACTTTGGT CTGTTCCGCG ACCGCCGTTT CTCAGGTCTT GACCGCATCG CCGATGCAAA CCAAGTGACC CTAGGTGTGA CCACGCGTTT CTTCGACGAT CACAACCAAG AGGCGACTAA GTTCAGCCTA GGTCAGATCC TCTATCTGCA GGACAGTAAG CTGGGTTACG AAGATAACCT CTTCGAGCAA AATCAATCGA CCTCAGTATT GGCCGCCGAG TTAGATACCC GCTTAAGCCA TGACTGGTAT TTAGGTGCGG CGATTCAATA CGACACCAAC TCGAGCAATA ACAAGAAGAC CGAAGTCACC TTAGACTTCC GCCCCGAAGC CAATAAACTA TTGCAGCTCA GTTATCGTTA TGTACCGGAT CTATTGAACT CCAACACTAA CGATCTGGTG AATATTTCCC AAGCGGGTGT GCGTGGCGCA TGGCCAATTA ACGACAGCCT GTATTTTGTC GGTAACTGGT ATTACGACCT CAACGAGAGC CGCAGCATAG AAACCTATAC AGGTTTCCAA TATGAATCAT GCTGTTATGC AATCCGCCTC AGCTATCACT ACCGAATTAA GACCAATTAC GATGACAACA TTGGTTCGGC CGTTATCGAT GAGCGCGAGC AATTTGAAAG CGGTGTTTAC CTGAATTTAG TCATCAAAGG ACTCGGTGGT TCAGGCCCAT TAGGCGTATC GGATATGCTC AATGATGGTC TGTTTAACTA CAGAAAACCG CTTTATCTGA GGAATTAG
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Protein sequence | MQIRYFLALS LLPQLVLADE SPTASASQCV IEPPVPRIVS QPGLSAADQE KIRIVSDRSN AEMGKQAIFT GDVVFSQGDR HIAADEAILD QATEQFDANG NLVFQDNIFT VTADSLQAQM RSNRATLKGA QYWLHGQQVH GDAEKLQITM NNNLILTNTN FTTCPPDNVS WLLEAEKIKI NSEEEWGEIW NAKLRIADIP VFYIPYMTVP VSDKRKTGFL YPSFSTSTTN GFEVSAPYYW NIAPEYDLTF TPNYMSSRGL FTKTEFRYLA GEAQSGRLNL EYLGNDQMLS GSPNRYLYNW QHQGAIDKNW RVLANFTEVS DNNYFNDLKS DVNRATDNQL SRIGEVSYFE RNWDISTRVQ DIKVLGEDEK PYQVMPQVNF NYRAADFWNN LDFGFNSELT NFAHDDSDMN TATRLHMAPS LTLPIHGPSG SLTSQVKLMQ TNYWQEQNNS AFDGLDDTVS RTIPQVRING QINFERFTEL FDQNYRQTLE PQFQYLYVGY EDQRGIGIYD TAQLQDDYFG LFRDRRFSGL DRIADANQVT LGVTTRFFDD HNQEATKFSL GQILYLQDSK LGYEDNLFEQ NQSTSVLAAE LDTRLSHDWY LGAAIQYDTN SSNNKKTEVT LDFRPEANKL LQLSYRYVPD LLNSNTNDLV NISQAGVRGA WPINDSLYFV GNWYYDLNES RSIETYTGFQ YESCCYAIRL SYHYRIKTNY DDNIGSAVID EREQFESGVY LNLVIKGLGG SGPLGVSDML NDGLFNYRKP LYLRN
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