| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0905 |
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| Symbol | ksgA |
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| ID | 4251696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1054897 |
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| End bp | 1055703 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117468 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_733042 |
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| Protein GI | 113969249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.983231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.2455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA AAGTACATTT AGGCCACACG GCCAGAAAGC GTTTCGGACA AAACTTCTTA
ACCGACGACA ATGTGATTAA CCGCATTGTG GGTGCCATCG CCCCCGATAA TGACCACGTG
ATGGTCGAAA TCGGCCCCGG CCTTGGCGCC TTAACCGAAC CTGTCGCCAC GGCGATAGAT
AACCTGACCG TGGTTGAGTT AGACCGCGAT CTGGTTGAGC GCTTGCAGAA TCACCCAGTA
CTTAAGGATA AGCTCACGAT TCACCAAGGC GATGCGCTGC AGTTCGACTT TAGCCAGTTG
GTGGTACCGG GTAAAAAACT CAAAGTGTTT GGTAACTTAC CCTATAACAT TTCAACCCCT
TTGATGTTCC ATCTGTTCGA ATTTGCCGAG CAGATTGAAA CCATGCACTT TATGCTGCAA
AAAGAAGTGG TGCTGCGGTT ATCGGCAAGC CCTGGCAACA AGGCCTATGG CCGCTTAACT
GTGATGGCAC AGTACTTCTG CCAAGTGGTT CCCGTACTCG AAGTGCCGCC CCATAGCTTT
GCGCCACCGC CGAAGGTCGA TTCTGCCGTG GTACGTCTAC TGCCCTATGC AGAAAAACCT
TTCCCTTGTA AGGATGTGAA TGTACTGCGC CAGCTGTGCA CCACGGCCTT TAACATGCGC
CGTAAAACAC TGCGTAATAA CCTCAAGCAA GTGTTAAGCG ATGCAGAGTT TGAGCAACTA
GGCATAGATC CTAACCTGCG CCCTGAGCAA ATCAGCGTTG AACAATATGT CGCCATGGCG
AATATGGTGT GTGATAAGCA GGCTTAA
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| Protein sequence | MSSKVHLGHT ARKRFGQNFL TDDNVINRIV GAIAPDNDHV MVEIGPGLGA LTEPVATAID
NLTVVELDRD LVERLQNHPV LKDKLTIHQG DALQFDFSQL VVPGKKLKVF GNLPYNISTP
LMFHLFEFAE QIETMHFMLQ KEVVLRLSAS PGNKAYGRLT VMAQYFCQVV PVLEVPPHSF
APPPKVDSAV VRLLPYAEKP FPCKDVNVLR QLCTTAFNMR RKTLRNNLKQ VLSDAEFEQL
GIDPNLRPEQ ISVEQYVAMA NMVCDKQA
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