| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0901 |
|---|
| Symbol | |
|---|
| ID | 4251692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1050833 |
|---|
| End bp | 1051246 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638117464 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_733038 |
|---|
| Protein GI | 113969245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.129055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.931382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTA TGCCTGTAGC TTTGGCTGCA CTAATCGGAT TTAGCTATGT TTCTGTGCCA
ACCACGGCAA AAGCCGAAGC TGATCCACTT GTCGCGAGTA TTTGTGATTA CGTAAAAGCG
AACGATAAAA ACCGTTTACG TAAAAAACTA AAAGAAAGCC GTGTTAAGTT ACGCCAAGTG
TACAGCGGGA TTAGCTGTGA TGGTCAAAGC TTGTTGCGTA CTGCCTATGC CGCGAATGCG
AATGATGCCG GTGAGTTTGT GGCTAAGCGT TTATCAGTTA ACGAACTGAG CGTACCAGAA
GCCGATGGCA TGACGATTCA AGCGTGGGCT GAAGCCAATG GTCACGGTGC TAGCCCTATC
ACAGCGGCAG TCAAAGAGCG TCTAGGCGCT GCTGCTGGCG GTGAAGAAGA GTAA
|
|---|
| Protein sequence | MRLMPVALAA LIGFSYVSVP TTAKAEADPL VASICDYVKA NDKNRLRKKL KESRVKLRQV
YSGISCDGQS LLRTAYAANA NDAGEFVAKR LSVNELSVPE ADGMTIQAWA EANGHGASPI
TAAVKERLGA AAGGEEE
|
|---|
| |