| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0893 |
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| Symbol | |
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| ID | 4251684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1044926 |
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| End bp | 1045585 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117456 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_733030 |
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| Protein GI | 113969237 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00328532 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGACTT GGCAGGCATT TATTGACCAT CAACGTTCTC AACCCTATTA CCAGCAGTTG
ATAGCATTTG TGAATCAAGA GCGTGAATTG GGTAAGGTGA TCTATCCTCC TAAAGAGGAT
GTGTATAACG CCTTTAAAAC AACCCCATTG GAGCAAGTGC GTGTAGTGCT TATAGGTCAA
GATCCCTACC ATGGCCCCGA CCAAGCCCAC GGCCTGTGTT TCTCGGTTAA GCGAGGCATT
AAACCGCCGC CATCGCTAGC CAATATGTAT AAAGAGTTAG TGAACGATAT TCCCGGTTTC
CAAATCCCAA ATCATGGTGA TTTAACCCAA TGGGCGGAGC AGGGGATTTT GATGCTTAAT
ACCGTGCTGA CGGTGGAACA AGGGCAAGCC CACTCACATG CCAATGCAGG CTGGGAAACC
TTTACCACTG AGGCCTTAAA GCTGTTAAAT GCGCAGGAAC GGCCGATTAT TTTCGTACTC
TGGGGCAGTC ATGCTATCAA AAAAGGGGCG GTGATTACTG CGCCACAGCA TCAAATTCTG
TCGGGACCCC ACCCGTCACC ACTGTCGGCT TATCGCGGCT TCTTCGGTTG TGGGCATTTT
TCTAAAGTGA ATCAACTGCT GATGGCGCGG GGCGAAGCAC CGATCCAATG GCAGGTTTAA
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| Protein sequence | MATWQAFIDH QRSQPYYQQL IAFVNQEREL GKVIYPPKED VYNAFKTTPL EQVRVVLIGQ
DPYHGPDQAH GLCFSVKRGI KPPPSLANMY KELVNDIPGF QIPNHGDLTQ WAEQGILMLN
TVLTVEQGQA HSHANAGWET FTTEALKLLN AQERPIIFVL WGSHAIKKGA VITAPQHQIL
SGPHPSPLSA YRGFFGCGHF SKVNQLLMAR GEAPIQWQV
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