| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0887 |
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| Symbol | |
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| ID | 4251678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1038382 |
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| End bp | 1039848 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117450 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_733024 |
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| Protein GI | 113969231 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAA CACAGCCCGC TGCAATGCCC TTGGATAAAC ATTTTCTGCC AGAGAACCAG
TTACTGCTCA ATGCCGTGGG AGAAGGCATT TATGGGTTTG ATTTAAATGG TAATGCCGTC
TTTATTAATC CCGCCGCCGA GCGCATGACG GGCTGGAAGA ATGAAGAATT ACTCGGCAAA
AATATCCATA ATTGCCATCA TCATAGCCAC GCGGATGGCA GTCATTATCC CCAAGAAGAT
TGTCCCATCT ACAACACCTT GAAGGATGGA ATAGCAAGGG AAATCACCCA CGATGTGTTT
TGGCGTAAAG ATGGCAGCAG CTTTCCAGTA CATTACAGCT CGACGCCCGT CTATCGGGAC
AACAAGCTAA TCGGTGTGGT CGCGATATTT CGCGACATCA GTATTCAGAA ACAAACCGAG
CAGTCGCTAC GTCAAGCTTT AGCGCAGGTT CAAGCCCTGT CGGAGCAACT TGCCAGCGAA
AATCACTATC TCCAAGCCGA GTTAGCCGAT AAGACCGGCG ATGTGGATAT TTCGGGCAGC
AGCGCGGTGA TCCGTCATAT GATCCAGCAA CTGCATATGG TGGCCAATAC TGACAGTACC
GTATTAATTT GTGGCGAAAA TGGCACAGGC AAAGAACTGG TTGCCCGCAA CTTACATCAA
CTGAGTCGCC GTAAAGATAA GCCCATGATC AGCGTTAACT GCGCGGCGTT TTCAGCCTCA
CTGTTAGAGA GTGAGTTGTT TGGCCATGAG AAAGGCGCCT TTACCGGCGC GACACAGCAG
CGCAAGGGCC GCTTCGAACT CGCCCATCAA GGCACACTGT TTCTCGATGA GGTGGCCGAA
TTAAGTTTGG AGGCGCAATC TAAGTTGCTG CGGGTGATCC AAGAGCAATC CTTCGAACGA
CTCGGCGGCA GTGAAACCAT TAAGGTCGAT ATTCGCTTAG TCGCCGCCAG TCACCATGAT
TTACTCAAGC GCGTTGAACA GGGTTTATTC AGGATGGATC TCTATTACCG CTTGAATGTC
TTCCCAATCC AAGTGCCGCC GCTGAGAGCA AGACTTGAGG ACATGCCCGA GCTTGTCAGC
CACATATTGC ATTCCCTAAA CCGCAAACTC GGTAAGAAAC TGCGCGGCGT GAGCCAAAAA
GGTCTGCAAA AACTGATGGC CTACAGCTGG CCGGGTAATG TGCGTGAATT GCAAAATATC
CTCGAGCGGG AGGCCATTTT ATCTCAAACG GATATTTTAC AAATCCATGC CATGCCCACG
AATCACCTGC AGACTCAAAC CGCGGCTTCA CCATTGCAAA CCTTGGCCGA GGCGGAAGCA
CAACACATAG AGCAAACATT AAAGCAGCTC AATTGGCGTA TTTCGGGCCC CAATGGTGCG
GCCAATGTGC TCGGCGTCCC GCCAAGTACA CTCAGATCGC GGATGAAGAA GCTCGGGATT
ACACGTCAAA CCCCTGCGGA AGAATAG
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| Protein sequence | MTSTQPAAMP LDKHFLPENQ LLLNAVGEGI YGFDLNGNAV FINPAAERMT GWKNEELLGK
NIHNCHHHSH ADGSHYPQED CPIYNTLKDG IAREITHDVF WRKDGSSFPV HYSSTPVYRD
NKLIGVVAIF RDISIQKQTE QSLRQALAQV QALSEQLASE NHYLQAELAD KTGDVDISGS
SAVIRHMIQQ LHMVANTDST VLICGENGTG KELVARNLHQ LSRRKDKPMI SVNCAAFSAS
LLESELFGHE KGAFTGATQQ RKGRFELAHQ GTLFLDEVAE LSLEAQSKLL RVIQEQSFER
LGGSETIKVD IRLVAASHHD LLKRVEQGLF RMDLYYRLNV FPIQVPPLRA RLEDMPELVS
HILHSLNRKL GKKLRGVSQK GLQKLMAYSW PGNVRELQNI LEREAILSQT DILQIHAMPT
NHLQTQTAAS PLQTLAEAEA QHIEQTLKQL NWRISGPNGA ANVLGVPPST LRSRMKKLGI
TRQTPAEE
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