| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0882 |
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| Symbol | |
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| ID | 4251673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1031678 |
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| End bp | 1033519 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117445 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_733019 |
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| Protein GI | 113969226 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.274835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCAT CAAATCATAA ATCTTCGCAA ACGGTATTAC CGCATACTCC CGTTGAGTCA
CTGGCTTCTC CCCCCTCCAA GGTGCAAGAC AGAGCCGTAC TCCCCTGGAT TTGGCAATTT
CTTAAGCCCT ATCGCCTGCG GGTGGTCGCG GCGATTGTAT TTCTTTTGAT TGGCTCCTTG
GCCTGGCTAT CCCTCGGGCA GGGCGTGCGG TTGATGGTGG ACGAAGGTTT TATTAAGGAT
AACGCCCAGC GTCTCAATGA AATTATTTTG TTGGTACTGC TGATCACCGC AGTGAGTGGC
ACTGCGGTGT TTTGCCGATT TTATCTGATG ACTTGGCTCG GCGAGCGGGT CAGCGCCGAT
ATAAGGCTGA CGGTTTACAA TCAACTGCTG AAGTTGTCTC CAGCCTTCTA CGCCAAGGTG
CGTACCGGTG AGGTGATTTC GCGCTTTACC GCCGATTCGA CTCTGCTGCA AACCGTGGTC
GGCTCGAGTC TCTCGATGGC GCTGCGCTCC GGCGTGACTG TGATCGGTGG GTTGGCGATG
ATGGGGATCA CCAGCGTGAA GATGACGCTG CTGGTGCTAC TGGCAGTGCC TTTGGTGCTG
GGGCCTGTCG GTTTCTTTGG CCGAAAAGTG CGAACCTTAG CGCGGGAGAG TCAAGATAGG
GTGGCGGATT TGGGGGCCTA TGTGGATGAA ACCTTACATG AAATCCACAC AGTGCAAGCC
TATGGGCATG AGGATAAGGA CCGCAGTTTA TTCAATAGTC GTGTCGAAGA TGTGATGACC
GCCGCCAGTG GTCGTATTCG TTACCGTGCC ATGTTGATTT CCTCCGTGAT GTTTTTAAGT
ATCGCCGCCA TTGCATCTGT GACTTGGGTC GGCGCCCACG ACGTGATGTC GGGAAAGATG
ACGGGCGGCG AACTGTCGGC CTTTATGTTT TATGCCGTGA TGGTGGCAGG TGCCGTTGCG
ACCATCAGTG AAGTTGTCGG TGAGATCCAA CGCGCCTCGG GCGCCGCCGA GCGCTTAATC
GAACTGGCTG AAACTGAGGT CGATATTCCT GCGCCATTGG TGCCTAAAAC ACTGCCTGCG
AAAGTGCGTG GCGAGCTGCA ACTGCAACAG CTGAGTTTTC ATTATCCCGA GCAAACTCAG
TTAGTGCTCA GCGACTTAGA ACTGATGATT ACCGCGGGCG AGCGAGTGGC CTTGGTCGGG
CCGAGTGGTG CCGGTAAGAG TACCTTATTT CAGTTATTGC AGCGGTTTTA TGTGCCGTCT
TCGGGCAGCA TTCATTTGGA TGGGATTGAT ATTGCTGAGC TTTCACCAAA GGATTTACGG
GCGCAGTTTG CGCTTGTGCC GCAGGACTCA GTGATTTTTG CTACTAGTGT GCTGGAAAAT
GTGCGCTATG GCCGCGTCGA TGCCAGCGAG CAGGAGGTGA TTGATGCCTG TATTGCGGCC
CGTGTCCATG AGTTTATCAG CGAATTTAGT GAAGGTTATC AAACCTATTT GGGTGAGCGC
GGCGTGCGCT TATCCGGTGG TCAAAAGCAG CGTATCGCGA TTGCGAGGGC GATTCTAGCC
GACAGGCCTA TCTTGCTGCT CGATGAGGCG ACCAGCGCGC TCGATGCCTT AAGCGAGCAA
AAAGTGAAGC AGGCACTCGA TGAATTGATG AAGGGGAAAA CCACGCTTAT CATCGCCCAT
CGCCTTGCCA CTGTGATCAA TGCGGACCGA ATTATCGTGT TCGATAAGGG ACGTATCGTC
GCCAGTGGTA AGCATCAAAC CCTTTTACAA ACCAATGCGT TATATCGTGA GTTTGCCAGT
TTACAGCTGC TAACGGATGA CGTGAGTGCG CTTAGCGAGT AA
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| Protein sequence | MNSSNHKSSQ TVLPHTPVES LASPPSKVQD RAVLPWIWQF LKPYRLRVVA AIVFLLIGSL
AWLSLGQGVR LMVDEGFIKD NAQRLNEIIL LVLLITAVSG TAVFCRFYLM TWLGERVSAD
IRLTVYNQLL KLSPAFYAKV RTGEVISRFT ADSTLLQTVV GSSLSMALRS GVTVIGGLAM
MGITSVKMTL LVLLAVPLVL GPVGFFGRKV RTLARESQDR VADLGAYVDE TLHEIHTVQA
YGHEDKDRSL FNSRVEDVMT AASGRIRYRA MLISSVMFLS IAAIASVTWV GAHDVMSGKM
TGGELSAFMF YAVMVAGAVA TISEVVGEIQ RASGAAERLI ELAETEVDIP APLVPKTLPA
KVRGELQLQQ LSFHYPEQTQ LVLSDLELMI TAGERVALVG PSGAGKSTLF QLLQRFYVPS
SGSIHLDGID IAELSPKDLR AQFALVPQDS VIFATSVLEN VRYGRVDASE QEVIDACIAA
RVHEFISEFS EGYQTYLGER GVRLSGGQKQ RIAIARAILA DRPILLLDEA TSALDALSEQ
KVKQALDELM KGKTTLIIAH RLATVINADR IIVFDKGRIV ASGKHQTLLQ TNALYREFAS
LQLLTDDVSA LSE
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