Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0879 |
Symbol | |
ID | 4251670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1029269 |
End bp | 1030744 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117442 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_733016 |
Protein GI | 113969223 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGAGC GCGGATTTTG GTTCGACACT GAGCCTAAGT TAACTCAACG AGCCGTTTTA CCACCCTTAG AGCAGGATAT CAGCGCCGAT GTTGCCATTA TTGGTGCGGG GTATTCCGGG CTTTGGACTG CCTATTATCT AAAGCTATAC CAGCCAAATC TGTCTGTGGT TATCCTTGAG GCCGAACGCA TAGGCCAAGG TGCATCCGGT CGCAATGGTG GTTGGTTGAT GGGCAGTTTC AGTGGTGATG TGGCCTACCT TAATCGGCTC GAGGGCGAGC AGCGCCTTAG CGCTAAAGCC ATTATTCAAG CAACTATTTC TGAAGTGGCC ACAGTTTGCG CCAAGCATCA TATCGACTGT GATTTACACC ATGGCGGTAA CTTGCGGGTG GCGGCGCGTT ATTCCGAGCA ATTAGCCAAT ATTAAAGCCG AATTAGCGCA GTGGCGCGCA GAAGGTTTTG GTGAAGAAGA TATTCGTTGG CTGGATAAGA CAGAGCTCGA TAAGCAAGTG TCTATGGCCG AGGGCCAAGC GGCACTTTTT ACTCCCCATT GCGCGCGAAT ACATCCGGCG AAACTCGTCT GTGGTTTGGC TGACCTAGTG CAACGCTTAG GGGTGAAGAT CTACGAGCAT ACTCTAGTAA ATCACATGGC GCATCTTGGT GATGCACAAA CCCTATTGCA AACACCAAAG GGACGAGTTC GTGCGACGAT TGTGGTGCCC GCGGTGGAAG GTTATCTGCG TCAGCTCAGT GGACTTGGGC GATTTACCTT ACCCGTGCAG AGTTTACTTA TCGCCACTGA GCCGTTAACG GATGCCACAT GGGATGCAAT TGGCCTAGCC AATCGCGCGA CCTTTAGTGA TGCCAGCCGC ATAGTGACTT ATGGCCAGCG TAGCCCTGAT AATCGGCTGA TATTTGGTGC CCGTGGCGGC TATGGCTTTG GCGCGGAAAT ACGCACCGAA TTTGGTTTTG ACCCTAAACT GTTTAACGGG AAATTTCCTG CAAATCAAAG CCCACCTCAG TGTGATTTCG AGGGCGAATT TGGCTTTCGT TATCAATTAT TATTGGCGTT ATTTCCTCAA CTTAACGGCG TGCAAATTAC CCATGGTTGG GGCGGAACGT TAGCCTTGGC GAGGCGCTTT GCTCCCCATG CCATCTTTGA TCAAAGTCTG GGTTTAGGCC TGATTGGCGG CTATGGCGGG GAAGGTGTCG GGGCGGCAAA CCTATTTGCC CGCACGCTGG TGGACTTGAT ATTAGGGCGT GATACACAGC TTGCATCTAT GCCTTGGGCG TTTAATGCTC CAGTACAACA GGTATTAGCA CCCTGGGAGC GCGAGCCTTT GCCTTGGCTC GCATACCATG GCATGAATAA GATTTTTGCG TGGGAAGATA GGCTCTACAG TCAGCCAAAG AGTGCGGCTT GGCAAAAAGG TTTAGCTAAG CGGTTCGCGA ATCGATTAGA AGGCTTAATG AGTTAA
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Protein sequence | MKERGFWFDT EPKLTQRAVL PPLEQDISAD VAIIGAGYSG LWTAYYLKLY QPNLSVVILE AERIGQGASG RNGGWLMGSF SGDVAYLNRL EGEQRLSAKA IIQATISEVA TVCAKHHIDC DLHHGGNLRV AARYSEQLAN IKAELAQWRA EGFGEEDIRW LDKTELDKQV SMAEGQAALF TPHCARIHPA KLVCGLADLV QRLGVKIYEH TLVNHMAHLG DAQTLLQTPK GRVRATIVVP AVEGYLRQLS GLGRFTLPVQ SLLIATEPLT DATWDAIGLA NRATFSDASR IVTYGQRSPD NRLIFGARGG YGFGAEIRTE FGFDPKLFNG KFPANQSPPQ CDFEGEFGFR YQLLLALFPQ LNGVQITHGW GGTLALARRF APHAIFDQSL GLGLIGGYGG EGVGAANLFA RTLVDLILGR DTQLASMPWA FNAPVQQVLA PWEREPLPWL AYHGMNKIFA WEDRLYSQPK SAAWQKGLAK RFANRLEGLM S
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