Gene Shewmr4_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0877 
Symbol 
ID4250599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1028187 
End bp1028738 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID638117440 
Producthypothetical protein 
Protein accessionYP_733014 
Protein GI113969221 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA TTATTACTGC GGAGCAAGTG CTGCATTTCT GGTTTGAGGA AATCTCACCT 
AAATCTTGGT GGATAAAAGA TCACGAGTTT GACGCCCTTA TCCAGTCCCG TTTTGAAGAA
TTGCTTAAAC AAGCAAAACG GGGCGAGCTT GCCGATTGGC GCGTCACCCC TCAGGGACGG
TTAGCCGAAA TCATAGTGCT GGATCAATTC TCCCGAAATA TCTATCGCGA CACACCCGCT
GCCTTTGAGG CCGATACTAT CGCGCTCGTC CTTGCCCAAG AGGCCGTCGC CCAGCAGGTT
GACCAAGCAC TTAAGCCAAA ACAGGTGCCC TTTTTATTTA TGCCTTACAT GCATAGCGAG
TCGGCCGTCA TTCATCAGGT CGCCGAAAAG TTATTCAATC GAGAAGCGGC AATCGCCAAT
TTAGAATTTG AGCTTAGACA CAAAGCCATC ATTGACAGAT TTGGCCGTTA TCCTCATCGA
AACAAGATAT TAGGCAGAGA ATCCACCACA GATGAAATCG CCTTTTTAAC CCAGCCGGGG
TCCTCTTTCT AA
 
Protein sequence
MSHIITAEQV LHFWFEEISP KSWWIKDHEF DALIQSRFEE LLKQAKRGEL ADWRVTPQGR 
LAEIIVLDQF SRNIYRDTPA AFEADTIALV LAQEAVAQQV DQALKPKQVP FLFMPYMHSE
SAVIHQVAEK LFNREAAIAN LEFELRHKAI IDRFGRYPHR NKILGRESTT DEIAFLTQPG
SSF